Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3726 ATGTGCAGTGTCTTAAACACCATACTATTACTACTGTTGTCAGTTCTTTTGTGTGCTTCCTCCACCTCCACCTCCACCGCTCAACACCGCCACAACCGCCGTGTCCTCCACCAGCCTCTGTTTCCTACAGTCTCTGCTCCTCCTCCAACACAACCACCAGCTTCCTCTCCTGAAACCCAACCAAAACGACAAAAGCAACAACCCAAGCTCCCATTTTCTTCAACCTCTTCCTCTTCTCCACCACCAAAGTCTTTCTTCCCTTCCTACCAAACGCCATCGCTCCCTCCTCCGCCACCTCTCATCGCCACATTCCCGGCCAACATCTCCTCCCTCCTCCTCCCCAGACCAAACTCCCACCGCCACCGCCACGCCGCCTCCGTCGCCGCTGCGGTCACCATCTCTCTCCTCTCTTTAGCTCTCATCTCCGCCGCAGCTGTCTTCGCCCACCGCCGCTGGAAACTCGCCGCCTCCTCCTCAACTCATGATGACGACAAGGCCTCGAGATCCGACAGCCTCCGCCTCTTCCCGCCGAACGCCGCCGCGCGGAAGCCACGCGGGAAAATGAGCCCGAGGTCGGAGATGCTCTACCTCGGCACGGTGGCCAGCTCAGAAGGTACTGCTGACTCGAGCAGCTGCAATGGGGATTTTCGGCCACCGTATCGGAGACTGAATGACTCGCCGGAGCTTAATCCTCTGCCTCCCCTGCCTCGTTACAACCACAGAGCATGGACCAGTGGAGAACACGATGAAGAAGAGAAGAAGGAGAAGAGTGAAGAGGAAAACGAAGATGAACAGTTCTTTTCTCCAAAAGGGTCTTCTTCTGATTCTGGAAACAGAGAACAGAGTCCTCCTCTTTCACCACCTCACGTTCTTGCTGCATCAAGCTCTCGTTCCTTGAAAGCCATTGATAGATTCTGCAGAAGCTTCACTTCAAGAACACCATCTTACCCTCGTTCCAATTCTCTCTCTAGTTCCATTTCTCCTTCTCCTTCTCTGAATTTGAGCCCCTCAAGTGTCAAATCTCTAACACCCCATCACAACCCTGCATCCCCATCTTTCTCTTCTTCTCCTTCTTTTCAGACCACCAAACTGCCTCCTCCTCCGCCGCCACCGCCACCTCCGCTGCCTCGGTTCTGGGAGGCTCCTGTGGTGACTAGTTTTGCTGAACCTTCTCAAAATGTGAATAAGAATGAAACTGAAGAGGCCCAAAAGCCTAAGTTGAAAGCTTTACATTGGGATAAAGTTAAAGCCAGCTCAGATAGGGTCATGGTTTGGGATCGGTTGAGACCCAGTTCTTTCCAGTTGAATGAGGACATGATTGAGACACTCTTTATGGTGAATAATTCCAATGGGAATTCTGGTTTGGGTGTTAGAGATAGCACTGCTTGGCGTCATGCGCTTCATTCTACTCCGGTGGTGCCACCAGAGAATAGGGCGCTTGACCCTAAGAAGTCTCAGAACATAGCAATTTTGCTCCGGGCACTAAATGTGACTATTGATGAAGTGTGTGAAGCTCTCAGAGAAGGCAGTTGTGATACATTGGGAACAGAACTTCTAGAAAGTTTATTAAAGATGGCTCCAACCAAAGAAGAAGAATCTAAGCTGAAGGAGTTTCGAGATGAATCACCCTTCAAGTTTGGCCCGGCTGAGAAATTTCTTAAAGTCATGCTTGATATACCTTTTGCATTCAAGAGAGTGGATGCCATGCTTTACATTGCTAATTTTGATTCAGAATTAGAGTACCTTAAGAAGTCCTTTGAAACTCTAGAGGTGGCTTGTGAGGAATTAAAGAATAGCAGAATGTTTCTGAAGATACTTGAAGCAGTTCTGAGAACAGGAAATCGTATGAATGTTGGCACCAATCGTGGTGATGCACACGCATTCAAACTGGACACTCTTCTGAAGTTAGTTGATATTAAGGGAACTGATGGAAAGACCAGCCTCTTGCATTTTGTTGTGCAGGAAATTGTCAGAACCGAGGGTTCTCATATCCCCGGTTCTAATCATCAACACGACCCCGCCGACAAAAACATTCAGCAATACACTCTTCAAGAGGAAGTAGACTTTAGGAAGCATGGACTGCAAATTGTTTCTGGATTGAGCGGGGAGCTTACCAATGTTAAAAAAGCAGCTGCTATGGACTCAGACACGCTAAGAAGTGATGTTGCAAAACTTGCCAGAGGAATAGAAAAAGTGGTGCAAGTTGTAAAGTTAAATGAAGAGTCACCTCTGAAAGAAGCTAACCAGAAATTTTCCGAGGCAATGAAAGGTTTCTTGGAGAGAGGAGAGGAAGAGATTTTAGCAATCCAGGCGCAAGAGAGAAATGCTATCTCTTCTGTAAAGGAGATAACTCAGTATTTCCATGGAAATTCAGCAAAGGAAGAAGCTCATCCATTTAGAATCTTTATGGTTGTGAGGGATTTCCTTTCAATACTAGATGGTGTTTGCAAGGAAGTTGGGAAAGTAAATGAGAGGACTTTAGTTGGTTCTCGTCAACATGTAATGCCTGCAAACCATGCACTGCCTGCAATGTTCCCTGAGATTATTGGGAAGCACCATTCTTATTCCTCAGAATCTGAGTAG 2583 0.4762 MCSVLNTILLLLLSVLLCASSTSTSTAQHRHNRRVLHQPLFPTVSAPPPTQPPASSPETQPKRQKQQPKLPFSSTSSSSPPPKSFFPSYQTPSLPPPPPLIATFPANISSLLLPRPNSHRHRHAASVAAAVTISLLSLALISAAAVFAHRRWKLAASSSTHDDDKASRSDSLRLFPPNAAARKPRGKMSPRSEMLYLGTVASSEGTADSSSCNGDFRPPYRRLNDSPELNPLPPLPRYNHRAWTSGEHDEEEKKEKSEEENEDEQFFSPKGSSSDSGNREQSPPLSPPHVLAASSSRSLKAIDRFCRSFTSRTPSYPRSNSLSSSISPSPSLNLSPSSVKSLTPHHNPASPSFSSSPSFQTTKLPPPPPPPPPPLPRFWEAPVVTSFAEPSQNVNKNETEEAQKPKLKALHWDKVKASSDRVMVWDRLRPSSFQLNEDMIETLFMVNNSNGNSGLGVRDSTAWRHALHSTPVVPPENRALDPKKSQNIAILLRALNVTIDEVCEALREGSCDTLGTELLESLLKMAPTKEEESKLKEFRDESPFKFGPAEKFLKVMLDIPFAFKRVDAMLYIANFDSELEYLKKSFETLEVACEELKNSRMFLKILEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTSLLHFVVQEIVRTEGSHIPGSNHQHDPADKNIQQYTLQEEVDFRKHGLQIVSGLSGELTNVKKAAAMDSDTLRSDVAKLARGIEKVVQVVKLNEESPLKEANQKFSEAMKGFLERGEEEILAIQAQERNAISSVKEITQYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKEVGKVNERTLVGSRQHVMPANHALPAMFPEIIGKHHSYSSESE* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3726 860 MobiDBLite consensus disorder prediction 242 266 - -
Lja4g3726 860 MobiDBLite consensus disorder prediction 155 296 - -
Lja4g3726 860 Pfam Formin Homology 2 Domain 400 812 IPR015425 -
Lja4g3726 860 Gene3D Formin, FH2 domain 403 838 IPR042201 -
Lja4g3726 860 ProSiteProfiles Formin homology-2 (FH2) domain profile. 397 838 IPR015425 -
Lja4g3726 860 PANTHER FORMIN-RELATED 15 858 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lja4g3726 860 MobiDBLite consensus disorder prediction 57 84 - -
Lja4g3726 860 MobiDBLite consensus disorder prediction 361 379 - -
Lja4g3726 860 PANTHER FORMIN-LIKE PROTEIN 2 15 858 - -
Lja4g3726 860 MobiDBLite consensus disorder prediction 267 293 - -
Lja4g3726 860 SMART it6_source 397 827 IPR015425 -
Lja4g3726 860 MobiDBLite consensus disorder prediction 310 360 - -
Lja4g3726 860 Coils Coil 579 599 - -
Lja4g3726 860 SUPERFAMILY Formin homology 2 domain (FH2 domain) 365 825 - -
Lja4g3726 860 MobiDBLite consensus disorder prediction 42 56 - -
Lja4g3726 860 MobiDBLite consensus disorder prediction 155 170 - -
Lja4g3726 860 MobiDBLite consensus disorder prediction 40 92 - -
Lja4g3726 860 MobiDBLite consensus disorder prediction 310 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3726 Lja-Chr4 69295550 69300108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3726 103 856 FH2 protein (formin) Gene Family AT2G43800 46.173 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3726 - - gmx:100786203 995.727