Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3722 ATGGCAAATTTAATGGAGATTGATAAGGCTAGAGGGAAGCATTCTTATGCAGTTTCACAAACACTGTTTGAGTTAGACATCAAGTATGTTCCAATCAAGCCTATTGGAAAAGGTGCTTATGGCGTAGTGTGCTCTTCCATCAATAGTGAGACTGATGAGAAAGTTGCAATCAAGAAGATTGGTAATGTGTTTGAAAATTGCACTGATGCTATGAGAGTTCTGAGGGAGATGATGCTGCTTAGACACATTCATCATGAGAATGTGATTGCTTTGAAAGATGTTATGATCCCAGACAAGAGAACAAGTTTCAAGGATGTCTACTTGGTCTATCAACTCATGGACACAGATCTTCATCACGTTATCAAGTCCTCTCAGCCACTCTCCAATGATCATTGCCAATTTTTCATGTTTCAGCTGCTTCAAGGTCTTGAATATCTTCACTCTGCAAAGATTCTTCATCGTGACCTGAAGCCTGGGAATCTGCTTGTGAATGCCAATTGTGACTTGAAGATATGTGACTTCGGGCTTGCAAGAACCAAAAGATTTGATGGCGAGTTCATGACAGAGTATGTTGTTACTCGATGGTATCGCGCACCAGAACTTCTGTTATGCAGTGATGATTATGGAACTTCTGTTGATATGTGGTCTGTAGGATGCATTTTTGCTGAGATTCTTGGTAGAAAGCCTATCTTCACTGGAACTGATTGCCTCAATCAACTGAAACTAATCATAAGCATTATCGGAACCCAGGATGAATCTGATCTTGACTTTATTGATAATCCGAGATCGAGGAGTTTCATCGAATCACTTCCCTATAGAAGGGGCATAGAGTTCTCTCAGCTATATCCACAAGCTGATCCATTGGCAATTGATTTGCTGCAAAGATTGCTTGTATTTCACCCAGCTAAAAGAATCACTGCCTCAGAAGCACTTCAACATCCATATTTTGCTGGTATATTTGATCCAATGCGTGAGCCTCCTGCTCAGGTTCCCATCAAAATTGACATAGTTGAAAGTAGGAAAGAAGAGATTATCAGGGAAATGATGTGGAATGAGATGCTTCATTATCATCCTCCTGAAGCAGTATCTGCACTATAG 1098 0.4044 MANLMEIDKARGKHSYAVSQTLFELDIKYVPIKPIGKGAYGVVCSSINSETDEKVAIKKIGNVFENCTDAMRVLREMMLLRHIHHENVIALKDVMIPDKRTSFKDVYLVYQLMDTDLHHVIKSSQPLSNDHCQFFMFQLLQGLEYLHSAKILHRDLKPGNLLVNANCDLKICDFGLARTKRFDGEFMTEYVVTRWYRAPELLLCSDDYGTSVDMWSVGCIFAEILGRKPIFTGTDCLNQLKLIISIIGTQDESDLDFIDNPRSRSFIESLPYRRGIEFSQLYPQADPLAIDLLQRLLVFHPAKRITASEALQHPYFAGIFDPMREPPAQVPIKIDIVESRKEEIIREMMWNEMLHYHPPEAVSAL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3722 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lja4g3722 365 Gene3D Transferase(Phosphotransferase) domain 1 113 342 - -
Lja4g3722 365 ProSitePatterns MAP kinase signature. 64 167 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lja4g3722 365 SMART serkin_6 29 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3722 365 ProSiteProfiles Protein kinase domain profile. 29 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3722 365 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 359 - -
Lja4g3722 365 Gene3D Phosphorylase Kinase; domain 1 15 351 - -
Lja4g3722 365 SUPERFAMILY Protein kinase-like (PK-like) 28 324 IPR011009 -
Lja4g3722 365 Pfam Protein kinase domain 30 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3722 365 ProSitePatterns Protein kinases ATP-binding region signature. 35 59 IPR017441 GO:0005524
Lja4g3722 365 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3722 Lja-Chr4 69247477 69249437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3722 9 363 MAP Kinase Gene Family AT2G18170 74.085 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lja4g3722 Pkinase 2.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3722 K20537 - qsu:112009389 577.4