Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3720 ATGGAAGGAGGAGGAGGTGCACCGCTTGCTGATACCGACATGTCTGATGCGGCACCGCCGCCGCAGCCTGACCCACATCATCAGCAGCCGGCGGTGGCGATGGGGATCGAGAATATTCCGGCGACTCTCAGCCATGGTGGCAGGTTCATCCAATACAACATATTCGGTAACATATTTGAAGTCACCGCCAAATACAAGCCACCCATCATGCCCATCGGCAAAGGAGCTTACGGCATCGTCTGTTCTGCTTTGAACTCGGAGACAAATGAGCATGTTGCTATCAAGAAGATTGCCAATGCATTTGACAACAAGATTGATGCCAAGAGGACTCTCCGTGAGATCAAGCTGCTTCGCCACATGGATCATGAAAACGTTGTCGCAATCAGGGATATTGTGCCACCACCTCAAAGGGAGGTATTCAATGATGTTTACATTGCATATGAATTGATGGACACTGACCTTCACCAAATCATTAGATCAAACCAAGGATTATCAGAGGAGCACTGTCAGTATTTTCTGTATCAAATCCTCCGTGGGTTGAAGTACATACATTCTGCGAATGTTCTGCACAGGGACTTGAAACCTAGCAACCTTCTCCTGAACGCCAACTGTGACCTGAAAATATGTGATTTTGGACTGGCAAGGGTCACCTCTGAAACTGATTTTATGACTGAATATGTTGTCACAAGATGGTACCGTGCACCAGAGCTTCTGTTAAACTCTTCTGATTACACAGCAGCAATTGATGTGTGGTCTGTTGGTTGTATTTTCATGGAACTCATGGATCGAAAGCCTTTGTTTCCTGGCAGAGATCATGTTCATCAGTTGCGACTACTTATGGAGTTGATTGGCACCCCATCAGAAGATGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTACCTCCTTACCGCCGCCAATCTTTCCAAGAGAAGTTTCCGCAAGTCCACCCTGAAGCTATAGATCTTGTTGAAAAAATGTTGACTTTTGATCCTAGAAAAAGGATTACTGTTGAAGAAGCACTGGCACACCCCTACCTAACATCCCTGCATGACATCAGTGATGAACCTGTGTGCATGACTCCCTTCAGCTTTGATTTTGAACAGCATGCTCTGTCTGAGGAACAGATGAAAGAACTTATATACCGAGAGGCTCTAGCATTTAACCCTGAGTATCAGCAGTAG 1197 0.4561 MEGGGGAPLADTDMSDAAPPPQPDPHHQQPAVAMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEDDLGFLNENAKRYIRQLPPYRRQSFQEKFPQVHPEAIDLVEKMLTFDPRKRITVEEALAHPYLTSLHDISDEPVCMTPFSFDFEQHALSEEQMKELIYREALAFNPEYQQ* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3720 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Lja4g3720 398 Gene3D Phosphorylase Kinase; domain 1 49 388 - -
Lja4g3720 398 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3720 398 SUPERFAMILY Protein kinase-like (PK-like) 71 359 IPR011009 -
Lja4g3720 398 ProSitePatterns MAP kinase signature. 101 204 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lja4g3720 398 Gene3D Transferase(Phosphotransferase) domain 1 150 378 - -
Lja4g3720 398 SMART serkin_6 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3720 398 Pfam Protein kinase domain 71 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3720 398 ProSitePatterns Protein kinases ATP-binding region signature. 72 96 IPR017441 GO:0005524
Lja4g3720 398 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 396 - -
Lja4g3720 398 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 396 - -
Lja4g3720 398 MobiDBLite consensus disorder prediction 1 29 - -
Lja4g3720 398 CDD STKc_TEY_MAPK 59 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3720 Lja-Chr4 69224398 69237018 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3720 1 398 MAP Kinase Gene Family AT2G43790 87.531 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lja4g3720 Pkinase 1.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3720 K14512 - gmx:547616 756.133