Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3718 ATGGAGATTGATAAGGCTAGAGGGAAGCATTCTTATGCAGTTTCACAAACACTGTTTGAGTTAGACATCAAGTATGTTCCAATCAAGCCTATTGGAAAAGGTGCTTATGGCGTAGTGTGCTCTTCCATCAATAGTGAGACTGATGAGAAAGTTGCAATCAAGAAGATTGGTAATGTGTTTGAAAATTGCACTGATGCTATGAGAGTTCTGAGGGAGATGATGCTGCTTAGACACATTCATCATGAGAATGTGATTGCTTTGAAAGATGTTATGATCCCAGACAAGAGAACAAGTTTCAAGGATGTCTACTTGGTCTATCAACTCATGGACACAGATCTTCATCACGTTATCAAGTCCTCTCAGCCACTCTCCAATGATCATTGCCAATTTTTCATGCCTCCTTCAATAATTAAACTGTTATTAATGCAGCTGCTTCAAGGTCTTGAATATCTTCACTCTGCAAAGATTCTTCATCGTGACCTGAAGCCTGGGAATCTGCTTGTGAATGCCAATTGTGACTTGAAGATATGTGACTTCGGGCTTGCAAGAACCAAAAGATTTGATGGCGAGTTCATGACAGAGTATGTTGTTACTCGATGGTATCGCGCACCAGAACTTCTGTTATGCAGTGATGATTATGGAACTTCTGTTGATATGTGGTCTGTAGGATGCATTTTTGCTGAGATTCTTGGTAGAAAGCCTATCTTCACTGGAACTGATTGCCTCAATCAACTGAAACTAATCATAAGCATTATCGGAACCCAGGATGAATCTGATCTTGACTTTATTGATAATCCGAGATCGAGGAGTTTCATCGAATCACTTCCCTATAGAAGGGGCATAGAGTTCTCTCAGCTATATCCACAAGCTGATCCATTGGCAATTGATTTGCTGCAAAGATTGCTTGTATTTCACCCAGCTAAAAGAATCACTGCCTCAGAAGCACTTCAACATCCATATTTTGCTGGTATATTTGATCCAATGCGTGAGCCTCCTGCTCAGGTTCCCATCAAAATTGACATAGTTGAAAGTAGGAAAGAAGAGATTATTAGGGAAATGATGTGGAATGAGATGCTTCATTATCATCCTCCTGAAGCAGTATCTGCTTAA 1110 0.4018 MEIDKARGKHSYAVSQTLFELDIKYVPIKPIGKGAYGVVCSSINSETDEKVAIKKIGNVFENCTDAMRVLREMMLLRHIHHENVIALKDVMIPDKRTSFKDVYLVYQLMDTDLHHVIKSSQPLSNDHCQFFMPPSIIKLLLMQLLQGLEYLHSAKILHRDLKPGNLLVNANCDLKICDFGLARTKRFDGEFMTEYVVTRWYRAPELLLCSDDYGTSVDMWSVGCIFAEILGRKPIFTGTDCLNQLKLIISIIGTQDESDLDFIDNPRSRSFIESLPYRRGIEFSQLYPQADPLAIDLLQRLLVFHPAKRITASEALQHPYFAGIFDPMREPPAQVPIKIDIVESRKEEIIREMMWNEMLHYHPPEAVSA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3718 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 364 - -
Lja4g3718 369 SMART serkin_6 25 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3718 369 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Lja4g3718 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 364 - -
Lja4g3718 369 SUPERFAMILY Protein kinase-like (PK-like) 24 329 IPR011009 -
Lja4g3718 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Lja4g3718 369 Pfam Protein kinase domain 26 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3718 369 Gene3D Transferase(Phosphotransferase) domain 1 109 347 - -
Lja4g3718 369 Gene3D Phosphorylase Kinase; domain 1 11 356 - -
Lja4g3718 369 ProSitePatterns MAP kinase signature. 60 172 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lja4g3718 369 ProSiteProfiles Protein kinase domain profile. 25 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3718 Lja-Chr4 69213756 69215179 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3718 5 368 MAP Kinase Gene Family AT2G18170 72.253 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lja4g3718 Pkinase 4.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3718 K20537 - qsu:111983502 567