Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3711 ATGGGAAAGAAGGGGAGTTGGTTTGCTGCAATCAAGAGGGTGTTCACACATCACTCCAAGGGGAAGCAGGATTCAGATAGTAAAAACTCAAAAGAGAAGAAGAAAGGTGTAGGAAAACAAAGGCATGGAGAGACCAATTCTTTCATCCCCATCTTCAGGGAGCCAAGTAGCATTGAGAAAATATTTGGGGACTTCGAAAGAGAGCAACAACAGATACTCACGATTAGGCCTCCCACGCCTCCTGAGCAACCCAAAACGCCACCTTTTGTCCCGCCTCGAGCTGCTTCTCCCAGGGCTCCTTCTCCAAAGGCTCCATCTCCAAGGGCTGCGTCTCCCAGGTCTCCTTCTCCGCGAGTTACATCTCCCAAAGCTGCTTCTTCCCGTATCGTTCATCACCACAAGGAGGTTGGCTACAGACCAGAACCAACTCTAAAGAACCAACAGGCCTCAGCTACTAAGATCCAGGCTGTTTATAGAGGTTATATGGCTAGGAGGAGTTTTAGAGCTCTAAAGGGTCTGGTTAGACTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACAGTTAATGCTATGAAACACATGCAGCTTTTGGTGCGAGTTCAATCTCAGATCCAGTCTCGAAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCCGAGTTCAAGAATGATAAGGATGCTGCAAGTACCTTTGGCAAACGCACTTTAGGACATGGTTCTGAGGCAGGTAACAATGAAGAGTGGGATGATAGCATACTGAAAAAAGAGGAAGTAGATGCAAGGTTGCAGAGGAAAGTGGAAGCAATGATCAAAAGGGAAAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAAGCCACCCCAAAATCAACACAGACACCGGTGACCGATACGCGATCCGGCGGATTTCCGTGGTGGTGGAACTGGTTAGAAAGACAACTACCTGCAGCAAATCCACAAGAAAAACAAATCCTGAAGAATTTCCAACTCACACCTTCAAGACCATATTCAGAACAGAAAACTAGTCCAAGGCCTGGATCAAGCACTCCAAGACAGCACAATTTCGCCTTTGATAACATGGACACTCCCACTCCAAAATCCACAAAATCAACCATTCTTACATCTTCAAAACCTGCTAGAACTCCTCCATATAGAACTCCTCAAGCAAAACATCCAAGGTCAAGGGCTCTGGGAGCCAAGTCACCTTTCGACGTGCCGCTGAGGGATGATGACAGCCTCACAAGCTGCCCGCCGTTTTCAGTGCCGAGCTATATGGCTCCGACTGTTTCTGCACAGGCCAAAGTACGCGCTAATAGTAATCCCAGAGAAAGGTTTGGTGGAAGCGTTGGTGGTGGTACTCCTAGCAGTGATTCAAAAAGGAGACTTTCATTCCCTTTGTCCCAAGGAATTGGATCTTTTAAATGGACTAAAGGGTCCTTGTTCTCTAGCAAGGTTCCTAACTCTCAAAGGACACCAGACAATAATAAGTTTCAGACACTTGAATCAATAGGAAACGTGAGTGTGGATTCAACATTATCTTTGCCTGCAAGGGTGGGAAGAAAGCCATTTACAAGATTTGTGTGA 1596 0.4643 MGKKGSWFAAIKRVFTHHSKGKQDSDSKNSKEKKKGVGKQRHGETNSFIPIFREPSSIEKIFGDFEREQQQILTIRPPTPPEQPKTPPFVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPKAASSRIVHHHKEVGYRPEPTLKNQQASATKIQAVYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAASTFGKRTLGHGSEAGNNEEWDDSILKKEEVDARLQRKVEAMIKRERAMAFAYSHQLWKATPKSTQTPVTDTRSGGFPWWWNWLERQLPAANPQEKQILKNFQLTPSRPYSEQKTSPRPGSSTPRQHNFAFDNMDTPTPKSTKSTILTSSKPARTPPYRTPQAKHPRSRALGAKSPFDVPLRDDDSLTSCPPFSVPSYMAPTVSAQAKVRANSNPRERFGGSVGGGTPSSDSKRRLSFPLSQGIGSFKWTKGSLFSSKVPNSQRTPDNNKFQTLESIGNVSVDSTLSLPARVGRKPFTRFV* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3711 531 MobiDBLite consensus disorder prediction 1 131 - -
Lja4g3711 531 Pfam Protein of unknown function (DUF4005) 370 473 IPR025064 -
Lja4g3711 531 PANTHER IQ-DOMAIN 13 1 528 - -
Lja4g3711 531 MobiDBLite consensus disorder prediction 441 464 - -
Lja4g3711 531 MobiDBLite consensus disorder prediction 17 41 - -
Lja4g3711 531 Pfam IQ calmodulin-binding motif 149 168 IPR000048 GO:0005515
Lja4g3711 531 MobiDBLite consensus disorder prediction 332 386 - -
Lja4g3711 531 Coils Coil 527 531 - -
Lja4g3711 531 MobiDBLite consensus disorder prediction 77 112 - -
Lja4g3711 531 SMART iq_5 146 168 IPR000048 GO:0005515
Lja4g3711 531 MobiDBLite consensus disorder prediction 332 407 - -
Lja4g3711 531 Gene3D - 145 198 - -
Lja4g3711 531 ProSiteProfiles IQ motif profile. 147 175 IPR000048 GO:0005515
Lja4g3711 531 PANTHER IQ-DOMAIN 5-RELATED 1 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3711 Lja-Chr4 69094923 69100655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3711 1 530 IQD Protein Family AT3G59690 51.943 5.02e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3711 - - lja:Lj4g3v0510300.1 818.15