Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3666 ATGATAAGATATCCAAGCGCCACTGTCCACCACCAACTGAAATATCTCCATGTCCCAACAAATTTACATCACTCATTCATCAATCTCATACCCCATTCCTTTCCACTACCACCACACAAGCCTCACACCACCCTTCCTTCTCTGAGACTGGTGAAGCCTCTCCACTGCACACCACCATCATCCACCATGGATTCCAGCTCCACCAACACTGAAGAAGTAGCCTACGACCTCTCCCCCATCATGAAAGTTTACAAAAACGGCCGTGTAGAGAGGCTAGCCGGTGTAGATTTTGTTCCCACAGGCCTTGACCCCAAAACCAACGTTGAATCCAAAGACGTTGTTATCTCCAAAGAAGATGGCATATCAGCGAGGATTTTCATTCCGAAATCGACTAACCCTCCGCCGCAGAAGCTTCCTGTTCTTGTTTACTTTCACGGCGGCGCGTTCTGCATAGAAACGCCGTTTTCTGCGAACTACCACAACTACGTTACCTCTGTTGCCTCGCTTGCGAACGTGATTGGTGTGTCTGTTCACTACCGGAGGGCGCCGGAGCACCCTGTTCCGATAGCGCATGAAGATTCATGGCGGGCACTGAAATGGGTCGCTTCCCATGTCGGTGGAAACGGCCCTGATCCGTGGCTGAACGAGCACGGCGATTTTGGGAAAATGTTCTTCGCCGGAGACAGCGCCGGTGCCAACATAGCACACTATTTGGGTGTTCGGGTCGGGTCGGAAGGTTTGGGTTTTGATGGTGTGAGGATTGAAGGGTTAGTGTACGTGCATCCATATTTCTGGGGTGGTGAACGAATTGGGAAGGAGGGAGATAGGCCTGAGTATGTGCAGAAGGTGCATGATTTGTGGCGGTTTTCGTACCCGACCACGAGTGGATCCGATGACCCGCTTTTAAACCCGGCTAAGGATCCGAATCTTGGGAAGCTAGCTTGTGGGAGAGTGCTTGTTTGTGTGGCTGGGAATGATTTGTTGAGGGATAGGGGTTGGTACTACAAAGAGTTGCTTGAGAAGATTGGGTGGAGTGGAGAAGTGGAGGTGTTGGAAGCAAAGGATGAGGAGCATGTGTTTCATATGTTCAAACCAACATGTGAGAATGCTATGGTTTTGCTCAACCAAGTTGTCTCATTCATCAAGCAGGAATGA 1155 0.5013 MIRYPSATVHHQLKYLHVPTNLHHSFINLIPHSFPLPPHKPHTTLPSLRLVKPLHCTPPSSTMDSSSTNTEEVAYDLSPIMKVYKNGRVERLAGVDFVPTGLDPKTNVESKDVVISKEDGISARIFIPKSTNPPPQKLPVLVYFHGGAFCIETPFSANYHNYVTSVASLANVIGVSVHYRRAPEHPVPIAHEDSWRALKWVASHVGGNGPDPWLNEHGDFGKMFFAGDSAGANIAHYLGVRVGSEGLGFDGVRIEGLVYVHPYFWGGERIGKEGDRPEYVQKVHDLWRFSYPTTSGSDDPLLNPAKDPNLGKLACGRVLVCVAGNDLLRDRGWYYKELLEKIGWSGEVEVLEAKDEEHVFHMFKPTCENAMVLLNQVVSFIKQE* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3666 384 Pfam alpha/beta hydrolase fold 141 362 IPR013094 GO:0016787
Lja4g3666 384 SUPERFAMILY alpha/beta-Hydrolases 72 383 IPR029058 -
Lja4g3666 384 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 223 235 IPR033140 -
Lja4g3666 384 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 141 157 IPR002168 GO:0016787
Lja4g3666 384 PANTHER CXE CARBOXYLESTERASE 69 382 - -
Lja4g3666 384 Gene3D alpha/beta hydrolase 79 384 IPR029058 -
Lja4g3666 384 PANTHER ARYLACETAMIDE DEACETYLASE 69 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3666 Lja-Chr4 68494673 68496387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3666 72 382 Carbohydrate Esterase AT3G48690 46.855 1.01e-97 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3666 - - cam:101495689 543.117