Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3640 ATGAATTTCAGAAACTCTGGTGATAACCCCATTTGGGATGCAATGGGAGCTGGGAAGCCACAAGGGAATGTTCCTCTGGTGAGACAGTCATCATCAATTTACTCATTGACTTTTGATGAGTTGCAGAACACCATTGGTGGAATTGGAAAGGATTTTGGATCAATGAACATGGATGAGCTCTTGAAAAATGTGTGGACTGCTGAAGAGACTTCGTCTTTGGCTGGTGGAGGAGGAGAAGGTCATAACAACCCGGGTGGTAATTTGCAAAGGCAAGGTTCTTTGACATTGCCTAGGACTCTTAGTCAGAAAACAGTTGATGAGGTTTGGAGGGATTTGCTCAAAGAAAGTACTGGTGGAGCCCAAGATGGGAGTGGGAATGGTGGTTCATCCATGCCTCAAAGACAACCAACATTAGGTGAAATAACTTTGGAGGAGTTTTTGGTTAGAGCTGGGGTTGTGAGAGAAGACATGCCTCCACAACAAATTGGAAGGCCAAATGGAAATAATGGATGGTTTGGTGACTTTTCTAAATCCAACAATAACAGTGGTCCACTAATTCTTGGCTATCAACACCCAAATGGAAATAATGGGAATTTGGTTGAGGGAAATAACTTAGCTCCAAAACACATTCCTCCTCCAATAAACTCAAACCAATCTCAGAGACAAGCACAACAGCAACCTCCACCACTATTCCCTAAACCAGCAAATGTGACATTTGCTGCTTCTATGCATGCGTTAAACAATGCTCAACTTGCTAGCCCTGGGAGAAGGAGAGGGATGATTGGCGCCCCGGAACATTCAATGAATGGAACAATGATTCAAAGCAGTGCAGTTACTAGTGTTGGAATGCTTGGTTTAGCCCCAACCAATGTCTCAGCTCCAGGTGCTTCTCCAGGAAGTAAAATATCACCGGATGGGATCACAAAGAACAATGTAGATTCAATGTCACCAGTTCCTTGTGTGATCAACAGGGGAAGGAAGAGTGGTCCTGTGGAGAAAGTTGTTGAGAGGAGACAAAGGAGGATGATCAAAAATAGAGAATCAGCTGCCAGGTCACGGGCTCGCAAGCAGGCCTACACTTATGAACTAGAGTCTGAAGTTGCAAAATTGAAGGAAATAAACAGGGAATTGCAAAGAAAACAAGAAGAAATTATGGAAATGCAGAAAAATAAGGATTTGAACTCTGGGTACAAGCCATGGGGAAATAGTAAAAGACAATGCTTGAGGAGGACACTTACAGGTCCTTGGTAG 1251 0.4349 MNFRNSGDNPIWDAMGAGKPQGNVPLVRQSSSIYSLTFDELQNTIGGIGKDFGSMNMDELLKNVWTAEETSSLAGGGGEGHNNPGGNLQRQGSLTLPRTLSQKTVDEVWRDLLKESTGGAQDGSGNGGSSMPQRQPTLGEITLEEFLVRAGVVREDMPPQQIGRPNGNNGWFGDFSKSNNNSGPLILGYQHPNGNNGNLVEGNNLAPKHIPPPINSNQSQRQAQQQPPPLFPKPANVTFAASMHALNNAQLASPGRRRGMIGAPEHSMNGTMIQSSAVTSVGMLGLAPTNVSAPGASPGSKISPDGITKNNVDSMSPVPCVINRGRKSGPVEKVVERRQRRMIKNRESAARSRARKQAYTYELESEVAKLKEINRELQRKQEEIMEMQKNKDLNSGYKPWGNSKRQCLRRTLTGPW* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3640 416 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 340 355 IPR004827 GO:0003700|GO:0006355
Lja4g3640 416 MobiDBLite consensus disorder prediction 1 20 - -
Lja4g3640 416 CDD bZIP_plant_BZIP46 337 391 - -
Lja4g3640 416 SMART brlzneu 333 396 IPR004827 GO:0003700|GO:0006355
Lja4g3640 416 MobiDBLite consensus disorder prediction 71 101 - -
Lja4g3640 416 MobiDBLite consensus disorder prediction 116 135 - -
Lja4g3640 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 335 386 IPR004827 GO:0003700|GO:0006355
Lja4g3640 416 MobiDBLite consensus disorder prediction 210 226 - -
Lja4g3640 416 MobiDBLite consensus disorder prediction 205 235 - -
Lja4g3640 416 MobiDBLite consensus disorder prediction 119 135 - -
Lja4g3640 416 Pfam bZIP transcription factor 337 390 IPR004827 GO:0003700|GO:0006355
Lja4g3640 416 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 18 416 - -
Lja4g3640 416 MobiDBLite consensus disorder prediction 84 101 - -
Lja4g3640 416 MobiDBLite consensus disorder prediction 291 317 - -
Lja4g3640 416 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 416 IPR043452 GO:0003700|GO:0045893
Lja4g3640 416 SUPERFAMILY Leucine zipper domain 337 385 IPR046347 GO:0003700|GO:0006355
Lja4g3640 416 Gene3D - 335 392 - -
Lja4g3640 416 MobiDBLite consensus disorder prediction 249 268 - -
Lja4g3640 416 Coils Coil 360 390 - -
Lja4g3640 416 MobiDBLite consensus disorder prediction 293 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3640 Lja-Chr4 68038140 68041701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3640 23 416 bZIP Transcription Factor Family AT4G34000 46.460 9.68e-105 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja4g3640 bZIP_1 8.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3640 K14432 - gmx:100776600 521.931