Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3626 ATGGAGCAAGTTCAGTGTTTCGGCCGCAAGAAAAACGCGGTGGCGGTGACCTACTGCAAGCGCGGCCGTGGCTTGATCAAGATCAACGGCTCCCCAATCGAGCTTATCGAACCGGAGATTCTCCGATTCAAGGCCTTCGAGCCCATCCTCCTCTTGGGGAAGAGCCGCTTCGCCGGCGTCGACATGCGCATCCGCGTCAAGGGCGGAGGACACACCTCGCAGATTTACGCCATTCGTCAGAGCATTGCGAAGGCGCTTGTTGCTTTCTACCAGAAGTATGTTGATGAACAGAGCAAGAAGGAGATCAAGGATATTCTGATCCGTTACGATAGGACCTTGCTTGTTGCTGATCCTAGGCGCTGTGAGCCGAAGAAGTTTGGTGGTCGTGGTGCTCGCTCCAGGTTCCAGAAGTCTTACCGTTGA 423 0.5485 MEQVQCFGRKKNAVAVTYCKRGRGLIKINGSPIELIEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILIRYDRTLLVADPRRCEPKKFGGRGARSRFQKSYR* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3626 140 Pfam Ribosomal protein S9/S16 8 140 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lja4g3626 140 PANTHER RIBOSOMAL PROTEIN S9 1 140 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lja4g3626 140 ProSitePatterns Ribosomal protein S9 signature. 68 86 IPR020574 GO:0003735|GO:0005840|GO:0006412
Lja4g3626 140 Gene3D - 1 140 IPR014721 -
Lja4g3626 140 SUPERFAMILY Ribosomal protein S5 domain 2-like 3 140 IPR020568 -
Lja4g3626 140 PANTHER - 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3626 Lja-Chr4 67869236 67869998 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3626 2 140 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.489 2.91e-90 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3626 K02960 - gmx:100812117 272.707