Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3617 ATGAAGAGCAACTCAAACCCCAAGCTCATACTCCTCCACTCTCCCCTTCACAAACAAATCCCACCACCACTACCCTCTCACTACCACCGCCTCTGCTTCTTCTTCCTCCTCCTCCTCACCTTCTTCATCTTAACCTTCACCCTCATTACCTCCACCATCTCCGCCACCACTTCCTCCGCCGCAAGCTCCACCTCTCCCCTCCCACCTTCCATCTCCAGAGCCCTCCTCCACTATGCCTCCTTCAACTCCACCACCGCAGCCAACAAAGCCATGTCCCCTGCCGAAATCAACGCCGTCGCAACCACCCTCCTCCGCACCCCACCGCGTCCCAACCTCCTCATCTTTGGCCTCACCCACGAGTCCCTCCTCTGGTCCGCACTCAACCACAATGGCCGCACCGTTTTCCTCGACGAGAACGAGTACGCCATCTCCAAATTCGAACAATCCAACCCCGGCGTCGAAGCCTACGACGTTCAGTTCACTACAAAAGTAAGCGAGCACGCTCAGCTTCTCTCTCAGGCGAGAGCAGAGTCCACCGGAGATTGCAGACCCGTTCAGAATCTCCTCTTCTCGGAATGCAAGCTCGGAATCAACGATCTGCCAAACCACATTTACCAAATCTCATGGGACGTGATTCTCATCGACGGGCCGCGCGGGTATTCTGCTGCAAATCCAGGGAGAATGTCGGCGATCTTCACGGCGGCGGTGCTGGCGAGGAGTAAGAAATCCGGCAGCACCCATGTTTTTGTTCACGATTTCAAGAGGGAAGTTGAGAGGATTTTCAGTGATGAGTTTCTGTGTCAGGAGAATCTGGTTCAGAATGTGGATCAATTGGGGCATTTCGTAGTGAAGAGTGAAAAGGGAGGAAGCTCCTCCCAATTTTGCAGGAACTCCAGCTCGTTGCTGTCATTGTCGGTGTCGAAGGTGTCGGCGAAGAAGAAGATTAAGGAATCACTTTCCTTTTCTAAGAAATTGTAA 978 0.5337 MKSNSNPKLILLHSPLHKQIPPPLPSHYHRLCFFFLLLLTFFILTFTLITSTISATTSSAASSTSPLPPSISRALLHYASFNSTTAANKAMSPAEINAVATTLLRTPPRPNLLIFGLTHESLLWSALNHNGRTVFLDENEYAISKFEQSNPGVEAYDVQFTTKVSEHAQLLSQARAESTGDCRPVQNLLFSECKLGINDLPNHIYQISWDVILIDGPRGYSAANPGRMSAIFTAAVLARSKKSGSTHVFVHDFKREVERIFSDEFLCQENLVQNVDQLGHFVVKSEKGGSSSQFCRNSSSLLSLSVSKVSAKKKIKESLSFSKKL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3617 325 PANTHER OS11G0490100 PROTEIN 6 301 IPR006514 GO:0045492
Lja4g3617 325 PANTHER CDC2 PROTEIN KINASES-LIKE 6 301 - -
Lja4g3617 325 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 67 295 IPR006514 GO:0045492
Lja4g3617 325 Pfam Polysaccharide biosynthesis 95 281 IPR021148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3617 Lja-Chr4 67714706 67715797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3617 - - vun:114176135 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1437 4 13176897 13185497 Lja4g3617 4 67714706 67715797 PCT