Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3616 ATGGTTTTATTCAAGCAATATTCTTCAGTTACATTGTTTCTCCCCTTCCTTCTTTTCCTCCTAGTGAATTCCCAGATCATTGTAAGTCCATTACCATTAGTCCCGGACATTTTAAGCTTCATAGACCAGAGGCTCGCTGAAGTCTTCCCAATCATCCAAACTTTCAAGAACACAATCACCTCAGACCCTTTAGGAATAACCACAAATTGGGTCGGTCCCAACATATGCAACTACACAGGCTTCTACTGCGATCACCCGCCGGATAACTTCACCGCCACCACGGTCGCCTCCATAGATTTCAACGGCTTTGGCCTCTCTGCGCCCACCCTTGACGGCTTCATCGATCAACTCCCAGACTTAGCACTCTTCCACGCCAATAGCAACAACTTCTCTGGCACCATTTCACCGAAAATAGCAACACTCAAGAACCTATACGAACTCGATCTAAGTAACAACTTGTTCTCTGGGGCATTTCCAACTTCTGTCCTTAACCTCCCTACATTATCCTTTTTGGATATCAGGTACAACCTCTTCACCGGCGTGTTGCCGCCACCAATTTTCACGCAACCATTGGACGCGATTTTTCTCAACAACAACAACTTCATCCTAACACTTCCCAACAATTTAGGGGACACGAAAGCAGCTTATCTCACCTTAGCCAACAACAAATTCACCGGCTCTATTCCCAGTAGCATTGGAAGAGCATCATCAACGTTGGTCGAAGTGCTGCTGTTGAACAATCTCTTAACTGGTTGTCTCCCTTACCAAATTGGGTTCTTGAAAAATCTAACCGTGTTCGACGCAGGCGGGAACCGCTTGACGGGGCCGTTACCGTGCTCATTTGGGTGCTTGAAGAAAGTGGAGCAGCTAAACCTGGCGAGGAACATGCTGTCCGGACAGGTTCCAGAAGCGGTGTGCACGTTGAGGAGTTTGGCGAATTTTTCTCTGTCATATAATTACTTCACGGTATTGGGGCCCTTGTGCATGAAGTTGGTAAGAAGTGGTGTTTTGGATGTGAGGAAGAATTGTATTTCCGGTCTTCCTAATCAGAGATCTTTGACCGAGTGTGCAACGTTCTCCTTGCTTCCAACAACTTGTTCGCGCCCTGCATCGTGTAGTGACATGCCGTGTGAGGTTTCTTCAGGGAGCAAGCCACGAGAGAGAGCTAAAAGGAATTTGTTGTCATATTATGCTCTTTCGAGAAATAGAGTAGTTTTGTAA 1221 0.4636 MVLFKQYSSVTLFLPFLLFLLVNSQIIVSPLPLVPDILSFIDQRLAEVFPIIQTFKNTITSDPLGITTNWVGPNICNYTGFYCDHPPDNFTATTVASIDFNGFGLSAPTLDGFIDQLPDLALFHANSNNFSGTISPKIATLKNLYELDLSNNLFSGAFPTSVLNLPTLSFLDIRYNLFTGVLPPPIFTQPLDAIFLNNNNFILTLPNNLGDTKAAYLTLANNKFTGSIPSSIGRASSTLVEVLLLNNLLTGCLPYQIGFLKNLTVFDAGGNRLTGPLPCSFGCLKKVEQLNLARNMLSGQVPEAVCTLRSLANFSLSYNYFTVLGPLCMKLVRSGVLDVRKNCISGLPNQRSLTECATFSLLPTTCSRPASCSDMPCEVSSGSKPRERAKRNLLSYYALSRNRVVL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3616 406 Gene3D Ribonuclease Inhibitor 51 207 IPR032675 -
Lja4g3616 406 SUPERFAMILY L domain-like 55 346 - -
Lja4g3616 406 Gene3D Ribonuclease Inhibitor 208 385 IPR032675 -
Lja4g3616 406 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 402 - -
Lja4g3616 406 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 24 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3616 Lja-Chr4 67708754 67710282 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3616 38 377 Leucine-rich Repeat extension Gene Families AT3G24480 47.507 3.70e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3616 - - lja:Lj4g3v0620580.1 775.393