Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3614 ATGATAGAAACCAAGTCCCTGAGCTTCTTCTCACTCTTAGTATTTGCTCTCTTCTTCCTTCATTTTCACCTCCAAGTTAATTCCCAACACATAGCAGCTTCAGAAAGAGAAGCCCTAGGTCTGGAACAATCAGAACCCGAAACTGAACGAAAAGCACTCGAAATCATCATCGGTAGTGGCGGCGGAGGCAGCGGTGGCCCGTCTCCTGCCCCCTCCCCCGCCAGCTGCCCACCTCCCCCACCCAAACCACTCAGCCGTTTAGACAAAGCTCGCCGCGTCCTCCTCAAATTCGCCGCCAACATCGACGACCCCAACTGCTACACCAAAACCTGGAACAGCCAAACCGACACCTGCCAATTCAACGGCATCCGATGCGGCATATATCCAAACTCCAACGAGAGAGCCGTCGCCGGAATCGACCTCAACACCGCCGGCGTCTCCGGCAAAAACGGCAACGCTCTCTCCCTCTACGGCATCCTCGACAGCATCCCGGAACTCACATTCTTCCACGTGAACTCCAACAACTTCTCCGGCGCTGTCCCGAGCGAAATCCTCAAGTTCACCTACTTCTACGAGCTCGACATCAGCAACAACAAATTCTCCGGCGAGTTTCCGATGGATGTTCTCAAGTTCAGCTCCAAGCAGTTGATCTTCTTGGATATCAGGTTCAACCGCTACCACGGCGCGGTTCCGCCGCAACTGTTTAACCTCAACTTGGATGTCATTTTCATCAACAACAACCAATTCTCCGGTTACCTCCCGGAGAATTTCGGGTCAACGCCGGCAAGGTATCTCACCTTCGCCAACAACCTGCTCACCGGTCCGATCCCGAAAAGCATCGGGAACGCCTCGAAGACGCTCACGGAGGTTCTCTTCCTCGGTAACCAATTTGACGGTTGCTTACCGTACGAAATTGGTTACCTGAAGAGAGCCACCGTGTTCGACGTGAGTAACAATCACTTGACTGGTCCTATTCCTCAGTCATTTGCTTGTTTGGAGAAGATTCGGTTTCTGAATCTGGCTCAGAACAAGTTCTATGGTAAGGTTCCGGAGAGTGTTTGTGTTCTTCCGGGGATACGTAACAATGGGAATTTTTCACTTTCTGATAACTATTTCACTGAAGTTGGACCTGAATGTTGGAAGCTGATTAAGTCTAAGGTTCTTGATGTTTCTAAGAATTGCATTCCCGGGCTTTCGAATCAGAAGTCGCCGAAAGAATGCTATGATTTTAAGTGTAAGGTGAAGCCATGCCAGAATCAACAGAGTTTAAGCTATGTTCCTTGTAAAGGGTATTGGCAGAAAGAGGGTGAATCCTCTGTTTCTAAAGCATCTAGTGCACCATCTGAGCCTGTAACTTACAAGTCTCTCAAACCACATCGCTTGAGACTGTGA 1392 0.4978 MIETKSLSFFSLLVFALFFLHFHLQVNSQHIAASEREALGLEQSEPETERKALEIIIGSGGGGSGGPSPAPSPASCPPPPPKPLSRLDKARRVLLKFAANIDDPNCYTKTWNSQTDTCQFNGIRCGIYPNSNERAVAGIDLNTAGVSGKNGNALSLYGILDSIPELTFFHVNSNNFSGAVPSEILKFTYFYELDISNNKFSGEFPMDVLKFSSKQLIFLDIRFNRYHGAVPPQLFNLNLDVIFINNNQFSGYLPENFGSTPARYLTFANNLLTGPIPKSIGNASKTLTEVLFLGNQFDGCLPYEIGYLKRATVFDVSNNHLTGPIPQSFACLEKIRFLNLAQNKFYGKVPESVCVLPGIRNNGNFSLSDNYFTEVGPECWKLIKSKVLDVSKNCIPGLSNQKSPKECYDFKCKVKPCQNQQSLSYVPCKGYWQKEGESSVSKASSAPSEPVTYKSLKPHRLRL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3614 463 Gene3D Ribonuclease Inhibitor 87 262 IPR032675 -
Lja4g3614 463 PANTHER BNAC05G26270D PROTEIN 19 458 - -
Lja4g3614 463 MobiDBLite consensus disorder prediction 57 83 - -
Lja4g3614 463 Gene3D Ribonuclease Inhibitor 263 425 IPR032675 -
Lja4g3614 463 SUPERFAMILY L domain-like 91 395 - -
Lja4g3614 463 MobiDBLite consensus disorder prediction 438 463 - -
Lja4g3614 463 Pfam Leucine rich repeat N-terminal domain 89 125 IPR013210 -
Lja4g3614 463 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 19 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3614 Lja-Chr4 67658057 67660146 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3614 99 410 Leucine-rich Repeat extension Gene Families AT3G24480 42.812 6.44e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3614 - - cam:101512430 554.288