Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3612 ATGGGTTACTCCTCTTCTCCCACGCTCATCCTACTATCACTCATAGGGATGTTTTCCTTGATCTTCGGGGTTTGGATGATCATCACCCCCTCAAGCGTCAGGTTCCACGTAACTGAGGCTTCCCTAATGCAATTCAATCTCACAAGCAACAACACCTTATATTTCAAATTCAGGGTCAAAATCTCAGCAAGAAACCCCAACCACAACGTCAAGATCTATTATAGAAGGATCAGAGCAGTTGCTTGGTACAAAGATAATGACTTTAGTGGGGTGGTTTTGACACCCTTTGATCAAGGCCACAAGAATACCTCATTCCTTGAGCCTGCACTTGCTGAGTATAACGAGGAGACACGTTTAGGGATATACCATGACTTGGCTGTAGATTTGGATCTTCGAATTAGAGCTAAGTATGGTAGCATCAAGGGTCTTCGTTTCAATCCCCCCATTATAAGGTGTCGCCGTTTGAGAGTTCCTTTGATTTCTAATGATGATTCAACAACTGATTTCAATGTCACGGGCTGCCAAAGTGATTATTTCTTTGATAGCCGTGGAGATTATGAGGACTATTTCCTCAACCATAGATATTGGTAG 591 0.4281 MGYSSSPTLILLSLIGMFSLIFGVWMIITPSSVRFHVTEASLMQFNLTSNNTLYFKFRVKISARNPNHNVKIYYRRIRAVAWYKDNDFSGVVLTPFDQGHKNTSFLEPALAEYNEETRLGIYHDLAVDLDLRIRAKYGSIKGLRFNPPIIRCRRLRVPLISNDDSTTDFNVTGCQSDYFFDSRGDYEDYFLNHRYW* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3612 196 Pfam Late embryogenesis abundant protein 60 137 IPR004864 -
Lja4g3612 196 PANTHER HARPIN-INDUCED 1 14 180 - -
Lja4g3612 196 PANTHER OS05G0367900 PROTEIN 14 180 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3612 Lja-Chr4 67571437 67572069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3612 27 167 SNARE and Associated Proteins AT1G32270 23.871 3.72e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3612 - - lja:Lj4g3v0630970.1 367.081