Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3610 ATGGAGTCAACTACCCAAAAGTCCCTCTTCATCATCAAGAACCTTATTTTTTTCTGCTTCTTCTTCTTTCAAATCTCACACTCACACTCACACTCAACTTCAACTCCAAGATCAAAACCTCACATATTCCCCAAAGAAGCACTCCCTACAAAATCTGGTTACCTCCCAGTGGACCCCACCACCACATCCTCCATTTTCTACACTTTCTATGAAGCCCAAAACTCCACTTCACCTCTCTCCCAAACCCCACTTCTCATCTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGATCGGCAACTTCTACGAGCTCGGACCCTGGCGTGTCACCAATTCCCTCACCCTTGAACCAAACCCTGGCTCCTGGAACCGAATTTTTGGCCTTCTGTTTCTTGATAGTCCCATTGGAACCGGTTTCAGCGTCGCGGCGACACCCGAAGAAATCCCAGCTGATCAAACCGGTGTCGCGAAACACCTTTTCGCGGCGATAAAAGGGTTTATTCAGCTTGATCCTGTGTTTAAGGATCGGCCTATTTATATTACAGGTGAAAGCTATGCTGGGAAGTATGTTCCTGCTATTGCACACTATGTGTTTGATAAAAATACTCAGTTGGAGGAATCTGAGAGAGTGAATTTGGCTGGTGTGGCGATTGGGGATGGGCTAACTGACCCGGTAACGCAAACGGTTACTCATGCTGCGAATGCTTATTATGTTGGATTGATTAATGAGAAGCAGAAGATTGAGCTGGAGAAGGGTCAATTGGAAGCTGTTAGGTTGGTGGAGACAGGGAATTGGAGTGAAGCCACGGACACGAGGAGGCATGTGTTGAGAGTGTTGCAGAATATGACAGGGTTGGCTACTTTGTATGACTATACAAGGAAAGTTCCTTATCAAGATGATTTGGTTGGGGAATTCTTGAATTTTCCTGAGGCGAAGAAGGCCTTAGGGGTGAAGGTGAATGAATCGTTTGTGTACGAGTTGTGCAGTGATGTTGTTGGGGCTGTGTTACATGCTGATGTGATGAAGAGTGTGAAATACATGGTGGAGGACTTGGTGAGGAAGAGCAGGGTGTTGTTGTATCAGGGTCAGTATGATTTGAGGGATGGTGTGGTCCAAACTGAGGCTTGGGTGAAGACAATGAAATGGGAGGGGATTGAGCAGTTTCTTAATGCGGAAAGGAAGATTTGGAAGGTGAATGGTGAGCTTGCTGGGTATGTGCAAAATTGGAAGTCTTTGACCAATGCTGTGGTTTTGGGGGCTGGCCATCTTTTGCCTACTGACCAGGCTGTGAATTCTCAAGTAATGATTGAAGATTGGGTTTTGGAAAGGGGTTCGTTTAAAAGTGTCGTCCAGCAGGAAAAAGTATCAGGAAGTTCTAAACTTGCTGTGGAACTATCTAAGATTAACCGTTAG 1413 0.4621 MESTTQKSLFIIKNLIFFCFFFFQISHSHSHSTSTPRSKPHIFPKEALPTKSGYLPVDPTTTSSIFYTFYEAQNSTSPLSQTPLLIWLQGGPGCSSMIGNFYELGPWRVTNSLTLEPNPGSWNRIFGLLFLDSPIGTGFSVAATPEEIPADQTGVAKHLFAAIKGFIQLDPVFKDRPIYITGESYAGKYVPAIAHYVFDKNTQLEESERVNLAGVAIGDGLTDPVTQTVTHAANAYYVGLINEKQKIELEKGQLEAVRLVETGNWSEATDTRRHVLRVLQNMTGLATLYDYTRKVPYQDDLVGEFLNFPEAKKALGVKVNESFVYELCSDVVGAVLHADVMKSVKYMVEDLVRKSRVLLYQGQYDLRDGVVQTEAWVKTMKWEGIEQFLNAERKIWKVNGELAGYVQNWKSLTNAVVLGAGHLLPTDQAVNSQVMIEDWVLERGSFKSVVQQEKVSGSSKLAVELSKINR* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3610 470 Gene3D alpha/beta hydrolase 29 451 IPR029058 -
Lja4g3610 470 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Lja4g3610 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 448 IPR001563 GO:0004185|GO:0006508
Lja4g3610 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Lja4g3610 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Lja4g3610 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Lja4g3610 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 412 425 IPR001563 GO:0004185|GO:0006508
Lja4g3610 470 SUPERFAMILY alpha/beta-Hydrolases 45 440 IPR029058 -
Lja4g3610 470 PANTHER CARBOXYPEPTIDASE 38 448 - -
Lja4g3610 470 Pfam Serine carboxypeptidase 47 440 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3610 Lja-Chr4 67542018 67543791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3610 298 440 Calmodulin-binding Proteins AT2G22960 22.917 2.48e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3610 K09645 - gmx:100780822 682.945