Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3601 ATGGATGCGTGCAAAGAAGAAGGGTTATCTTCATCTTACTACACCATTCTTGGTGTTAGTTTAGATTCTTCAGTTGATGAGATAAGACGTGCTTATAGGAAACTTGCAATGCAATGGCATCCTGATAGGTGGACGAGAACACCTTCTTTGCTTGGTGAAGCCAAGCGCAAATTCCAGCAAATTCAAGAAGCCTATGCAGTGTTATCTGACCCCAAGAAAAGAACGATGTATGATGCTGGTTTGTATGATCCTCAAGAGGAAGAGGATGAGGGCTTTTCTGATTTTGTAGAAGAAATGGCATCTCTCATGGCACAAGTGAGGAATGAGGGGAAGGATTATGGTTTGGAGGAATTGCAGAGCATGTTGATGGAAATGGTTGAAGAATTTGAGTCTCCTTCAATGTACTCTTGTGAGGTACCATCAGTGATTGATGAATCCCAGTGCTCGAAGAGGATGCGTTTCGAGTTCGACACAACCATGGAGAACAAGGGATCACATTTTCAAGTGCCGGGTCTTAACTTCTATGAAACAAGAGGATACTGTAATTAG 549 0.4244 MDACKEEGLSSSYYTILGVSLDSSVDEIRRAYRKLAMQWHPDRWTRTPSLLGEAKRKFQQIQEAYAVLSDPKKRTMYDAGLYDPQEEEDEGFSDFVEEMASLMAQVRNEGKDYGLEELQSMLMEMVEEFESPSMYSCEVPSVIDESQCSKRMRFEFDTTMENKGSHFQVPGLNFYETRGYCN* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3601 182 Pfam DnaJ domain 13 78 IPR001623 -
Lja4g3601 182 PANTHER PUTATIVE, EXPRESSED-RELATED 7 181 - -
Lja4g3601 182 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Lja4g3601 182 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
Lja4g3601 182 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Lja4g3601 182 CDD DnaJ 13 70 IPR001623 -
Lja4g3601 182 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 181 - -
Lja4g3601 182 Gene3D DnaJ domain 10 123 IPR036869 -
Lja4g3601 182 SMART dnaj_3 11 73 IPR001623 -
Lja4g3601 182 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lja4g3601 182 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lja4g3601 182 PRINTS DnaJ domain signature 53 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3601 Lja-Chr4 67351634 67352708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3601 13 79 C2H2 Transcription Factor Family AT1G74250 50.000 8.90e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3601 - - lja:Lj0g3v0084989.1 340.117