Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3595 ATGGGTTACGTCTGTTGGATGCTCGGTACACCTCTCATGTTATTGCTTCCCTTCCTAATTTTCTGGATAATTATTTCCCCATCAAGTGTCAAGTTCCATGTAACTGAGGCCTCCCTAACACATTTCAACCTCACAAGCAACAACACCTTATATTTCAAATTTAAAGTCGACATTTCAGCGAGAAACCCCAACAACAATGTCAAGGTCTATTACAGAAGGATCAAAGCAATTGCTTGGTACAAAGATAACGACTTTGGCTGGGTGAGTTTGACACCCTTTGATCAAGGCCACAAGAACACCTCATTCCTCGAGCCTATAGTGTTTGAAGGGCATAGCGCCATGAAACTTAAACCTCGCCAGATTGCTGAGTATAATGAGGAGACACGTGTGGGGGTTTACAATGACTTAGCTGTAGATTTGGATCTTCGAATTAGAGCTAAGTATGGAGGAATAAAGGGCAGACGTTTCAATCCACCCATTGTAAGGTGTCGTCGTTTAAGAGTTCCTTTGATTTCAAGTGATGAATCAACACCTCCTCTCAACCGCACCAGCTGCAGTAGTAGTTATTTTTTTTTTAGTCGTCATAGTCGTTATCATAGTGGTTATTTCATGCGACGTTGGTCAAAGCAAAAGTCACGGAAAATTACAGACTAA 654 0.4159 MGYVCWMLGTPLMLLLPFLIFWIIISPSSVKFHVTEASLTHFNLTSNNTLYFKFKVDISARNPNNNVKVYYRRIKAIAWYKDNDFGWVSLTPFDQGHKNTSFLEPIVFEGHSAMKLKPRQIAEYNEETRVGVYNDLAVDLDLRIRAKYGGIKGRRFNPPIVRCRRLRVPLISSDESTPPLNRTSCSSSYFFFSRHSRYHSGYFMRRWSKQKSRKITD* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3595 217 Pfam Late embryogenesis abundant protein 58 155 IPR004864 -
Lja4g3595 217 PANTHER HARPIN-INDUCED 1 12 191 - -
Lja4g3595 217 PANTHER OS05G0367900 PROTEIN 12 191 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3595 Lja-Chr4 67178770 67179423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3595 24 177 SNARE and Associated Proteins AT1G32270 31.410 2.62e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3595 - - lja:Lj4g3v0630970.1 291.967