Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3592 ATGATGGAGGAGCCTAGTAGTAGCAACATGAAATCCGATTTCGTTGAGGTAAACATGGAAGTGCACCAAGTTGTCTCACCACCCTACATGAGCACCTTACAGAAGCTCATGACCAAACTCAAGGAAACATTTTTCCCTGATGATCCTCTACGCCAATTCAAGGGACAACCACTTAACAGAAGACTGATCCTTGGAGCTCAATACATTTTCCCTATTCTTCCATGCCTTTCTAATTATAACTTTTCACTCTTCAAATCTGACCTTATTGCTGGTCTCACCCTTGCTAGCTTGGCCATCCCTCAGGGAATCAGTTATGCAAAGCTTGCAAGTCTTCCTCCAATTGTGGGATTGTATTCTAGTTTTGTTCCGCCACTTGTTTATGTTGTTCTTGGAAGCTCAAGGGATATTGGACTGGGACCTGTTTCTGTTACTTCTCTTGTATTGGGATCCATGCTCTCAGACGAAGTGTCTCCCTTAACAGAGCCACATTTGTTTCTTCAGCTAGCGCTTACTTCAACGTTCTTTGCGGGTGTTTTTCAAGCTGCTCTTGGATTTCTAAGGCTAGGATTTATCATTGATTTTCTTTCTAAGGCGACCCTTATTGGGTTCATGGCTGGAACTGGTGTAATTGTGTCTTTTCAACAGCTAAAGAACATCCTTGGAATCATACATTTCACTAAACAGACGGCTCTGGTTCCTGTTTTGCGCTCTATTTTTCACAATAGAGACGAGTGGTCATGGCAAACAATAGTTATGGGGGTTTGCTTCTTGGTGTTGCTACTGCTAGCAAGACACATCAGCATGAGGAGGCCACGTCTTTTCTGGGTATCAGCAGGAGCTCCACTTTTGTCTGTCATTGTCTCTACCGTCCTGGTTTTTGGAATCAAGGGTCAAAATCATGGCATCAGTGTAATTGGAAAATTGGAAAAAGGAATAAATCCTGTTTCAGCAGATATGTTGGTCTTTAAGGGAAGTCATCTTGGTCTAACCATCAAAGTCGGGATTATCACTGGAATTTTATCCCTCACTGAAGCAATTGCAGTGGGAAGGACATTTGCAACTCTGAAAAACTACAAACTCGATGGAAATAAGGAAATGATTGCACTTGGGTGCATGAATATGGTTGGCTCCACCACATCCTGCTACGTCACAACAGGAGCTTTCTCTCGTTCAGCTGTCAATCATAACGCAGTAATTGGCCTCATTGATATCCCTGCTGCTTGTGTCATTTGGAAGATAGACAAATTCGACTTCGTTGTGATGATGGTTGCATTCTTTGGTGTTATTTTTTACTCAGTCCAGATTGGCCTTGCTATGGCAGTCTGCTTATCAATTTTGAGGGTGCTTATGCAAGTTACAAGGCCTAAAACAGTATTGTTAGGGAACATCCCAGAGTCAAATATATATAGAGATCTTCACCATTATGAGGAAGCTACAAGAGTTCCTGGTTTTCTTATTTTAGGTATAGAGGCTGCCATCAATTTTGCAAACATCACATATCTCCATGACAGGATATTGCGATGGATGGACGAAGAAGAAGATACCATGACAGGAAACTCACACCTTCGGTTTGTGGTTCTGGAAATGTCAGCTGTGAGTTCGATAGACACAAGCGGGGTCACACTTTTCAAGGAGTTGAAAGGAACATTGAAATTGAAGGGTATTGAGCTTGTGATGGTGAATCCTCTAGCTGCGGTCTTTGAAAAGCTAAAAAGAGCGGATGCAACTAAAGATTTCATTCAACCAGATCACCTTTTCTTGACAGTTGGAGAAGCTGTAGCTTCACTTTCATCAGCAATGAAGGACCAATCATCAACCAGGGAAGAAGAGGAGCATGGAATTCCACTTGAGTCTAGTGACTATGTTAAATTGATGACACGTAGACACAAATGGATATTGACTTAG 1905 0.421 MMEEPSSSNMKSDFVEVNMEVHQVVSPPYMSTLQKLMTKLKETFFPDDPLRQFKGQPLNRRLILGAQYIFPILPCLSNYNFSLFKSDLIAGLTLASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYVVLGSSRDIGLGPVSVTSLVLGSMLSDEVSPLTEPHLFLQLALTSTFFAGVFQAALGFLRLGFIIDFLSKATLIGFMAGTGVIVSFQQLKNILGIIHFTKQTALVPVLRSIFHNRDEWSWQTIVMGVCFLVLLLLARHISMRRPRLFWVSAGAPLLSVIVSTVLVFGIKGQNHGISVIGKLEKGINPVSADMLVFKGSHLGLTIKVGIITGILSLTEAIAVGRTFATLKNYKLDGNKEMIALGCMNMVGSTTSCYVTTGAFSRSAVNHNAVIGLIDIPAACVIWKIDKFDFVVMMVAFFGVIFYSVQIGLAMAVCLSILRVLMQVTRPKTVLLGNIPESNIYRDLHHYEEATRVPGFLILGIEAAINFANITYLHDRILRWMDEEEDTMTGNSHLRFVVLEMSAVSSIDTSGVTLFKELKGTLKLKGIELVMVNPLAAVFEKLKRADATKDFIQPDHLFLTVGEAVASLSSAMKDQSSTREEEEHGIPLESSDYVKLMTRRHKWILT* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3592 634 Pfam Sulfate permease family 84 397 IPR011547 GO:0016021
Lja4g3592 634 ProSiteProfiles STAS domain profile. 474 596 IPR002645 -
Lja4g3592 634 PANTHER BNAA09G30120D PROTEIN 397 597 IPR030313 -
Lja4g3592 634 PANTHER BNAA09G30120D PROTEIN 20 397 IPR030313 -
Lja4g3592 634 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Lja4g3592 634 Pfam STAS domain 475 592 IPR002645 -
Lja4g3592 634 Gene3D STAS domain 454 598 IPR036513 -
Lja4g3592 634 PANTHER SULFATE TRANSPORTER 397 597 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lja4g3592 634 CDD STAS_SulP_like_sulfate_transporter 475 589 - -
Lja4g3592 634 SUPERFAMILY SpoIIaa-like 479 596 IPR036513 -
Lja4g3592 634 PANTHER SULFATE TRANSPORTER 20 397 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3592 Lja-Chr4 67139147 67144299 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3592 16 601 Inorganic Solute Cotransporters AT3G15990 56.598 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3592 K17471 - gmx:100819130 874.774