Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3591 ATGGAAATCTCTAGCAGCCATAACAGCAGTAGTAGCATGATGTGGTTTTTCAAGGACAGAGGGTTTGATGATAACAGCATACAAGGCATGTTCCGAAAATGCAAGCGCCTCGAGGTTGTGCATCAGGAGAAAGCCAATGAGAATTGGGAGTATTTGAGAAGCATTGGAATTCAAGAAAGGAAATTGCCCTCAATTGTTTCGAAATGCCCTAAGATTCTCGCGTTGGGTCTCAATGAGAAGATTGTGCCCATGGTTGAGTGTCTCAAGACACTAGGTACAAAACCCCATGAAGTTGCCTCTGCCATAGCCAAGTTCCCTCACATACTCTCTCACAGTGTGGAGGAGAAGCTTTGTCCCCTTTTGGCATTCTTTCAGGCGCTTGGCGTGCCCGAAAAGCAAATCGGTAAAATGATACTGCTGAACCCTAGACTTATCAGCTACAGCATTGAAACAAAGATGGCAGAAATTGTGGACTTCCTTGCTGGCCTTGGTCTCAATAAAGATGGAATGATTGGAAAAGTTTTAGTCAAGGACCCGTATATTATGGGTTATAGTGTCGAGAAAAGGCTCGACCCTACTTCACAGTTTCTGAAGTCAATTGGTCTGGCTGAGAAGGATCTTCAAGTGGTGGCTATGAACTTCCCATCAATTTTGAGTAGAGATGTGAACAAGCTTTTGGTTCCCAATCACGCTTATTTAAAGAAATGTGGATTTCAAGACAGACAGATTGTCGATTTGGTGGTTGGATTTCCTCCTATCCTGATCAAGAGCATCCAGAATTCTTTGGAACCGAGGATCAAGTTCTTAGTAGATGTAATGGGGAGACAAGTTGATGAAGTCGTTGATTACCCTTGCTTCTTCCGGCATGGTCTAAAGAAAAAATTACAATTGCGGCACAAGTTTCTGAAGCAGAGGAATTTAAGTTGTAGCTTGAGTGAAATGCTGGACTGTAATGAGAAGAAGTTCCAAATGAAGTTTGGATTGTAA 987 0.4265 MEISSSHNSSSSMMWFFKDRGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCSLSEMLDCNEKKFQMKFGL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3591 328 PANTHER CGI-12 PROTEIN-RELATED 12 328 IPR003690 GO:0003690|GO:0006355
Lja4g3591 328 Pfam mTERF 7 168 IPR003690 GO:0003690|GO:0006355
Lja4g3591 328 Pfam mTERF 113 323 IPR003690 GO:0003690|GO:0006355
Lja4g3591 328 Gene3D Transcription termination factor 3, mitochondrial 105 327 IPR038538 -
Lja4g3591 328 SMART mt_12 63 94 IPR003690 GO:0003690|GO:0006355
Lja4g3591 328 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Lja4g3591 328 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Lja4g3591 328 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Lja4g3591 328 SMART mt_12 172 203 IPR003690 GO:0003690|GO:0006355
Lja4g3591 328 SMART mt_12 244 276 IPR003690 GO:0003690|GO:0006355
Lja4g3591 328 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Lja4g3591 328 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 12 328 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lja4g3591 mTERF 4.4e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3591 K15032 - gmx:100816929 557.755