Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3590 ATGGATGAGCCTAATAATGCCTGCACCATGCATTCTTCACATTGCATAGTAGAAATGGCCATGGAAGTACACCAAGTTGTTCCACCACCCCACAAGAGCACCTTGCACAAGCTCAAGGCTAGGCTCAAGGAAACGTTCTTCCCTGATGATCCTCTGCGCCAATTCAAGGGACAAACACTCAAGAACAAACTAGTCCTTGGAGCTCAATATGTGTTCCCTATTCTTCAATGGAGTCCTAGCTATAGCTTCAAAATCTTCAAATCTGACCTTATTTCTGGTCTCACCATTGCTAGCTTGGCTATCCCACAGGGAATCAGTTATGCTAAGCTTGCAGACCTTCCTCCAATTGTGGGACTCTATTCTAGCTTTGTTCCACCACTGATTTATGCTGTTCTTGGAAGCTCAAGGGACCTAGCAGTAGGACCTGTTTCAATTGCTTCTCTTGTGATGGGATCCATGCTGAGGCAGGAAGTGTCTCCCACTGGAGATGCAATTCTGTTTCTTCAACTGGCTTTTACTTCAACCTTCTTTGCTGGTCTTTTTCAAGCTTCTCTTGGAATCCTAAGGCTAGGATTCATCATTGATTTTCTATCTAAGGCAATCCTCATTGGGTTCATGGCTGGTGCTGCTATAATTGTCTCACTGCAACAGCTCAAGAGCCTCCTTGGAATCACCCATTTCACTGCACAGATGGGGTTGATTCCTGTTATGAGTTCTGTTTTTAACAATATACATGAGTGGTCCTGGCAAACTATACTGATGGGAATTTGCTTCATGGTGCTGCTATTACTAGCAAGACACGTTAGCATAAGGAGACCAAGGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTATGTGTGTCATCATCTCTACTCTTCTGGTTTTTGCAATAAAGGGTCAAAAGCATGGCATCAGTGTAATTGGAAAATTACAAGAAGGAATAAACCCTCCTTCATGGAATATGTTGCGCTTTCATGGAAGTCATCTTGGTCTCGTCGTGAAAACCGGCATTATCACTGGCATTTTGTCCCTCACTGAAGGTATTGCAGTAGGAAGAACATTTGCTGCACTAGGAAATTACAAAGTGGATGGAAATAAAGAAATGATGGCTATTGGGTTTATGAATGTGGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGCTCAGCTGTTAATAACAACGCAGGTGCGAAAACAGCAGTGTCAAATTTAGTGATGTCTGTGACGATCATGGTGACACTCCTTTTTCTGATGCCGTTGTTCCAATACACGCCTAATGTTGTGTTGGGTGCAATCATAGTCACAGCAGTGATTGGCCTCATTGATATCCCTGCTGCTTGTTACATTTGGAAGATTGACAAATTCGATTTCCTGGTCATGTTAACTGCTTTCTTGGGTGTTCTTTTCATCTCAGTTCAGAAAGGACTTGCTATTGCAGTTGGGTTATCAGTTTTAAAGATACTCCTGCAAATTACAAGGCCTAAAACAGTAGTGTTGGGGAAGATACCAGGGACAGAAATATATAGAAATCTTCATCAATACAACCAAGCTGTAAGAATACCAGGATTTCTTATTTTAAGCATTGAGGCTCCAATCAATTTTGCCAACATCACATATCTCAATGAGAGGACATTACGATGGATTGAGGAAGAAGATAATAAAAAGGAGCCCTTGAACCTTCGATTTTTAATCCTGGAAATGTCAGCTGTGAGCGCCATTGACACAAGTGGAATCTCATTTTTCAAGGAGTTCAAATCAACAATGGAAAAGAAGGGTGTTGAGCTTGTGTTGGTGAACCCTCTTGCTGAGGTCATAGAAAAGCTGAAAAAAGCAGATGAAGCTAATGAGTTCATAAGAGAAGATAACCTTTTCTTGACAGTTGGAGAGGCAGTAGCTTCACTTTCATCAGAAATGAAGGGTTAA 1935 0.4212 MDEPNNACTMHSSHCIVEMAMEVHQVVPPPHKSTLHKLKARLKETFFPDDPLRQFKGQTLKNKLVLGAQYVFPILQWSPSYSFKIFKSDLISGLTIASLAIPQGISYAKLADLPPIVGLYSSFVPPLIYAVLGSSRDLAVGPVSIASLVMGSMLRQEVSPTGDAILFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTAQMGLIPVMSSVFNNIHEWSWQTILMGICFMVLLLLARHVSIRRPRLFWVSAGAPLMCVIISTLLVFAIKGQKHGISVIGKLQEGINPPSWNMLRFHGSHLGLVVKTGIITGILSLTEGIAVGRTFAALGNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAVSNLVMSVTIMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAACYIWKIDKFDFLVMLTAFLGVLFISVQKGLAIAVGLSVLKILLQITRPKTVVLGKIPGTEIYRNLHQYNQAVRIPGFLILSIEAPINFANITYLNERTLRWIEEEDNKKEPLNLRFLILEMSAVSAIDTSGISFFKEFKSTMEKKGVELVLVNPLAEVIEKLKKADEANEFIREDNLFLTVGEAVASLSSEMKG* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3590 644 PANTHER SULFATE TRANSPORTER 22 640 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lja4g3590 644 TIGRFAM sulP: sulfate permease 73 634 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lja4g3590 644 Gene3D STAS domain 497 641 IPR036513 -
Lja4g3590 644 Pfam Sulfate permease family 86 466 IPR011547 GO:0016021
Lja4g3590 644 ProSiteProfiles STAS domain profile. 517 638 IPR002645 -
Lja4g3590 644 Coils Coil 605 625 - -
Lja4g3590 644 CDD STAS_SulP_like_sulfate_transporter 518 631 - -
Lja4g3590 644 Pfam STAS domain 519 634 IPR002645 -
Lja4g3590 644 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Lja4g3590 644 PANTHER BNAA09G30120D PROTEIN 22 640 IPR030313 -
Lja4g3590 644 SUPERFAMILY SpoIIaa-like 523 638 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3590 Lja-Chr4 67126902 67134486 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3590 1 644 Inorganic Solute Cotransporters AT3G15990 65.379 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3590 K17471 - gmx:100787284 1125.92