Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3584 ATGTCTGATTCCTTCACTAGCTTTTTTCCTGCCACTCCAAATTCCACCCATGATTCCCATGCTCCTCTTAATATGACTACAATCTCCTCAATAGCCCAACAACCATGTTGTATTTGCAACCATTGCAGCAATCTCCTCACCTTCAATCACCATGTTGCTCATGTTGTAGCAGAGGAAGGGTCATCAAGCAATGGAGGGTCCCATTTGCAGCAACAGCACAGCTCTAGGTGGAGTCCAACACCATTACAGATATTAGTCCTTGAGGAATTGTACAGGCAAGGCATGAAGACACCATCAGCTGAACAAATCCAGCAAATCGCTTCGCAGTTGCGCCGGTTTGGCAGGATCGAAGGGAAAAATGTGTTCTACTGGTTCCAGAATCACAAGGCGAGGGAGCGCCAGAAGCGTCGCCGCCGTGAGATGGAGGGAAATGTTGCTGCTTCTGGTACACAAGGGTTAAAAGAGACAGGTTCTGGTGTAAAAGAGGCAAAGAAGTGGGCATCCACTTCAAACTGCAGTGGACATGCAGAGGAATCAGCTGCACTGGAAATTATAGCAGAAAAGGGATCTATTGAGTTGGCTCAATTAGCAGAAATACAAGCTAAGTGCCAAAATATGGAAATGCCTTTTTTCCTTCCCATTTCAATGGAAGCTACAACTTCAGAATCAGCACAATGCAGACCACGCCACACACAACTTTTGACCCATGAGACCTATAATTTAACATCTGTGCTCAATAGAGAAAGTTATTTCAGCTATTATAATGAAGAAAATGAAGATCCTAGGACACTAGACCTTTTTCCAGTTAAGAGGGATGACCAAGATGGCAACTGTTTCGATGAGAAGAAATCTATGTTCTGTGCCAATGCTTCCATGGACTCTGAAGTCAATTCCAACCAGTTTTATGAGTTTCTTCCTCTAAGAAACTGA 930 0.4398 MSDSFTSFFPATPNSTHDSHAPLNMTTISSIAQQPCCICNHCSNLLTFNHHVAHVVAEEGSSSNGGSHLQQQHSSRWSPTPLQILVLEELYRQGMKTPSAEQIQQIASQLRRFGRIEGKNVFYWFQNHKARERQKRRRREMEGNVAASGTQGLKETGSGVKEAKKWASTSNCSGHAEESAALEIIAEKGSIELAQLAEIQAKCQNMEMPFFLPISMEATTSESAQCRPRHTQLLTHETYNLTSVLNRESYFSYYNEENEDPRTLDLFPVKRDDQDGNCFDEKKSMFCANASMDSEVNSNQFYEFLPLRN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3584 309 MobiDBLite consensus disorder prediction 134 160 - -
Lja4g3584 309 MobiDBLite consensus disorder prediction 1 21 - -
Lja4g3584 309 SUPERFAMILY Homeodomain-like 67 137 IPR009057 -
Lja4g3584 309 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 14 309 IPR044555 GO:0003700|GO:0099402
Lja4g3584 309 CDD homeodomain 76 130 IPR001356 GO:0003677
Lja4g3584 309 Pfam Homeodomain 74 134 IPR001356 GO:0003677
Lja4g3584 309 Gene3D - 61 147 - -
Lja4g3584 309 SMART HOX_1 72 139 IPR001356 GO:0003677
Lja4g3584 309 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 14 309 - -
Lja4g3584 309 ProSiteProfiles 'Homeobox' domain profile. 70 135 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3584 Lja-Chr4 67017056 67019910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3584 48 309 Wox Gene Family AT3G18010 34.268 5.35e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lja4g3584 Homeodomain 8.5e-19 CL0123