Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3550 ATGGCGGGGTTGAAGGTGCTGTCAGCTCTTGACTCGGCGAAGACACAGTACTACCACTTCAAGGCCATCATCATAGCAGGGATGGGGCTATTCTCCGACGCCTACGACCTCTTCACCATCACTCTCATCATCAAGATGCTGGGAAGGATTTATTACAGTGACTCACAAGAGATACGCCAGGTAAGCCCTGTCGTGGCGTCTGCCCTCGTGGCGGTCGCGCTGTTAGGGACCGCCACAGGACAGATTGTCTTTGGGTGGCTAGGTGACCACAAAGGACGCCGCCGTGTCTATGGGTTTGCTTTGTTGTTGATGGTTGTCAGCTCCTTGGCTTCTGGTTTCTCCATTTCTACAACAAGAACCGCCGTTCTCCTCTCTCTAGGCTTCTTCAGGTTCATCTTGGGGCTAGGGATTGGTGGAGACTACCCTTTATCTTCTACCATTATGTCCGAGTTTGCCAACAAAAGAACCAGAGGTTCTTTCATAGCGGCAGTGTTTTCCATGCAAGGATTCGGCATACTAGCCAGCGCAACCGTCACCATGGTGGTCTGCTCTATATTCCGCCGTGCGTCTAAGCCATCTTCCCCATTTGATACGCCTCGGGAGGCTGACGTTGCATGGAGGTTGATACTGATGATAGGCTCAGTTCCGGCAGCCATGACTTACTACTGGCGTATGATGATGCCTGAAACAGCCAGGTATACAGCATTAGTGGAACAAAATGTGTTGCAAGCAGCAAAGGACATGGAGAAAGTACTAGACATCTCAATAACCGACATCGTTGAAGAAAACCCAGTGCCACCAACCATGCATGCATATTCACTCCTATCTAAGGATTTCTTTCGTTACCACGGGCGTGATCTATTTGCTTGTTCCGCTAACTGGCTTCTAGTGGACATCGTGTTCTACAGCCAGGTTCTATTCCAGAGTGAAATATACAAGATCCACCTCAAGCCCAAAGAAGAAGTGGACTTGTATCAAGAGGCTTTCAACGTTGCAAAAATCCAAGCCATTATTGCTGTGTGCTCCACCATTCCCGGTTACTTCTTCTCAGTGTACTTCATTGATCGTGTGGGAAGAGTCAAAATCCAAATGATGGGTTTCTTCTTCATGGCATTGGCTTTTTTCGCCATTGGGATTCCCTATTACTCATATTGGACGGTTGACGACGATGACGGAGACAACAACGATAAAAGTAAAGGATTCATGGTCCTCTATGGTCTTGCTTTCTTCTTTGCAAATTTTGGACCCAACACCACCACTTTCATAGTCCCGGCAGAACTCTTCCCTGCCAGGTTTAGATCCACATGTCATGGAATTTCTGGGGCTTTTGGCAAAGTTGGGGCAATCATTGGATCTGTTGGGTTTGTGTGGGCTTCACATAAGAAGAAGGAGGAAGGATATCCAAAGGGGATTGGAATGAAAGTTTCCTTGATCATGCTTGGAGTGGTGTGCATAGTGGGCATGTTTGTCACATACTTTTTCACTAAGGAAACCAATGGACGCTCTTTGGAAGAAAATGAGATTGAGCCTCATCTGGAGCCTGAAGAGCATAATGGTCTTTAA 1563 0.4747 MAGLKVLSALDSAKTQYYHFKAIIIAGMGLFSDAYDLFTITLIIKMLGRIYYSDSQEIRQVSPVVASALVAVALLGTATGQIVFGWLGDHKGRRRVYGFALLLMVVSSLASGFSISTTRTAVLLSLGFFRFILGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASATVTMVVCSIFRRASKPSSPFDTPREADVAWRLILMIGSVPAAMTYYWRMMMPETARYTALVEQNVLQAAKDMEKVLDISITDIVEENPVPPTMHAYSLLSKDFFRYHGRDLFACSANWLLVDIVFYSQVLFQSEIYKIHLKPKEEVDLYQEAFNVAKIQAIIAVCSTIPGYFFSVYFIDRVGRVKIQMMGFFFMALAFFAIGIPYYSYWTVDDDDGDNNDKSKGFMVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGSVGFVWASHKKKEEGYPKGIGMKVSLIMLGVVCIVGMFVTYFFTKETNGRSLEENEIEPHLEPEEHNGL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3550 520 ProSitePatterns Sugar transport proteins signature 2. 132 157 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja4g3550 520 CDD MFS_PhT 23 498 - -
Lja4g3550 520 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 2 509 - -
Lja4g3550 520 Pfam Sugar (and other) transporter 24 506 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja4g3550 520 Gene3D MFS general substrate transporter like domains 18 519 IPR036259 -
Lja4g3550 520 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 509 - -
Lja4g3550 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 499 IPR020846 GO:0022857
Lja4g3550 520 SUPERFAMILY MFS general substrate transporter 10 507 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3550 Lja-Chr4 66521605 66526946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3550 1 509 Inorganic Solute Cotransporters AT1G76430 60.612 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3550 K08176 - gmx:100797683 758.059