Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3527 ATGAAGCTGGGGCTGATTTTCCTCTTCATTTCACTACTGCTCCCATTTTCTTCTTCGTCAAAACCCAGCAACCCATTCCTTGGAATCGCTCCTCAAGATGACAAGTATTACAAATCTTCCGATGTGATCAAGTGTAAAGATGGATCCGGAAAATTCAACAAAGACCACCTCAATGATGATTTCTGTGACTGCCTTGATGGCACCGATGAGCCTGGTACATCGGCATGTCCGCGTGGGAAGTTTTATTGTCGGAATGCGGGGCATTCTCCGGTTTACCTGTTTTCTTCTAGAGTGAATGATGGAATTTGCGATTGTTGTGATGGAACTGATGAATATGATGGCAAAGCAAAGTGCCCAAATACGTGCTGGGAGGCTGGGAAAGTTGCTCGGAATAAGCTGAAGAAAAAGATTGCCACGTATCAAGAGGGCGTCAAAGTGCGAAAGCAAGAAGTTGAACAGGCTAAATTAGCTATGGAGAAGGATGAGGCTGAACTTTCAAAATTGAAAAATGAAGAAAGTGTACTTAAAGGGATTGTGAAACAGCTTAAGGAGCATAAAGAACAAATAGAGAAGGCGGAAGAGAAGGAGCGTTTAGAGAAGGAAAAAGAAGAGAAGCAGAAAAAGGAGGCTGAGGAGAAGTCTAGTGAAAAAGAAATTAAAGCTGATGAAGATGTGGAACATAACAATGAGGTTGAAATGCCTTCACATGTTGAAGACAATGATGTGGCAAGTAACCATGATAACATTGAAATTCAAGAAGACTCTCCCACAAATCAGGACGGAGCAGGGGACAAATTAGCAGACGCACTTGATAATTCTGATGGAGCCACTGATAGTCCTGGAAGTGAAGGATCTTTGCATCATAAAGTAGAAGAGAATGCAAAAGAAGCTGAGGAAGAGCCTGCTGTTAAACCCGAAACTGATTTATTGACCGGAAAGGAAGACTCTTCTGAAGAAGTCATCAATACGGGGAAAGATGTATCTGAAAATACTGAGGGGTTATCAAAGGAGGAATTGGGCAAGCTTGTTGCTTCTCGTTGGACAGGAGAAGATACTGGTAAGAAAAATGCCGAAGCTGATACCTCATTAGACAATGAACATCAGGATGATCTCCCAAACGTCGAAGAATATGAAGGATATGCTTCTGAAACCGACGATGACAATCACAAATATGACGAAGAAGATGAAAACGAGGAAGAATATCGAGAAGAAGAGCATCATGATCATGACCTTAGTTCCTCCTACACTGATACTGAACCAGACTTGGCAGATGATTCCACAACAGATAGTCCTTCTTGGTTAGAGAAGATACAGAATTCTGTACGGAATATTTTTCAGGTTGTTAATATATTCCAGACTCCAGTGAACCAGTCAGATGCTGCTCGTATACGCAAGGAATATGATGAATCAAGTACCAAGTTGTCTAAAATACAGTCTAGAATATCGAGCCTGAAAAAAAAGCTAAAACAGGATTTTGGTCCAGCAAAGGAGTTTTATTCATTCTATGACCGATGCTTTGAGAGCAAGCAGAACAAGTACACTTACAAGGTCTGCCCCTATAAACAGGCTTCTCAGGAGGAGGGCTATTCCACCACCCGCTTGGGTCGCTGGGACAAATTTGAGGATTCGTACAAAGTAATGGTATTTTCTGAAGGTGATAAATGCTGGAATGGCCCTGATAGGAGTTTGAAGGTCAGGCTGAAATGCGGGTTGACATATGAGATTACTGATGTAGATGAACCAAGCCGCTGCGAGTATGTAGCTTTATTAGCTACCCCGGCCCTTTGTCATGAAGAAAAGCTGAAGGAATTACAACACAAACTAGACAAACTGAATTCGGAAATCCCAGAAAAACATGATGAGTTGTAA 1869 0.4189 MKLGLIFLFISLLLPFSSSSKPSNPFLGIAPQDDKYYKSSDVIKCKDGSGKFNKDHLNDDFCDCLDGTDEPGTSACPRGKFYCRNAGHSPVYLFSSRVNDGICDCCDGTDEYDGKAKCPNTCWEAGKVARNKLKKKIATYQEGVKVRKQEVEQAKLAMEKDEAELSKLKNEESVLKGIVKQLKEHKEQIEKAEEKERLEKEKEEKQKKEAEEKSSEKEIKADEDVEHNNEVEMPSHVEDNDVASNHDNIEIQEDSPTNQDGAGDKLADALDNSDGATDSPGSEGSLHHKVEENAKEAEEEPAVKPETDLLTGKEDSSEEVINTGKDVSENTEGLSKEELGKLVASRWTGEDTGKKNAEADTSLDNEHQDDLPNVEEYEGYASETDDDNHKYDEEDENEEEYREEEHHDHDLSSSYTDTEPDLADDSTTDSPSWLEKIQNSVRNIFQVVNIFQTPVNQSDAARIRKEYDESSTKLSKIQSRISSLKKKLKQDFGPAKEFYSFYDRCFESKQNKYTYKVCPYKQASQEEGYSTTRLGRWDKFEDSYKVMVFSEGDKCWNGPDRSLKVRLKCGLTYEITDVDEPSRCEYVALLATPALCHEEKLKELQHKLDKLNSEIPEKHDEL* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3527 622 MobiDBLite consensus disorder prediction 416 431 - -
Lja4g3527 622 MobiDBLite consensus disorder prediction 193 248 - -
Lja4g3527 622 Gene3D - 498 596 IPR009011 -
Lja4g3527 622 PANTHER BNACNNG14010D PROTEIN 10 622 - -
Lja4g3527 622 Pfam Glucosidase II beta subunit-like 21 170 IPR028146 -
Lja4g3527 622 MobiDBLite consensus disorder prediction 284 322 - -
Lja4g3527 622 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 10 622 IPR039794 -
Lja4g3527 622 Coils Coil 144 220 - -
Lja4g3527 622 MobiDBLite consensus disorder prediction 193 431 - -
Lja4g3527 622 SUPERFAMILY Mannose 6-phosphate receptor domain 508 597 IPR009011 -
Lja4g3527 622 Coils Coil 594 621 - -
Lja4g3527 622 ProSiteProfiles MRH domain profile. 503 598 IPR044865 -
Lja4g3527 622 MobiDBLite consensus disorder prediction 351 374 - -
Lja4g3527 622 Pfam Glucosidase II beta subunit-like protein 464 617 IPR036607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3527 Lja-Chr4 66224340 66233666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3527 17 622 Calmodulin-binding Proteins AT5G56360 58.188 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3527 K08288 - gmx:100807083 856.284