Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3459 ATGCTTTCCGCCATTCTTCCCTCCGACCCTCTTCTCAGCAACCCATTCTCCGCCTTCGCCGGCGGTTTCACGCCGCCGTGGGACTGCCACGATGACCCCTTATCCGATTACCTCAAACCCAGTACTGAACCCAAACCGGTAACTTCAAGTTCCGGTTCTGGCGGACCGATCCTAACCCATGAGAAACGTAAACCGGACCCGGACGAACCGGACCAGAGTGCTGAGCCGGTAATCGACGAGCGGAAGCGGCGGCGCATGATATCGAACCGGGAATCGGCGCGTAGGTCGCGTGTGCGTAAGCAGAGGCACCTAGAGAACCTTCGGAACCAGTTGAACAAGTGTAGGATGGAAAACCGGGAACTGAACAACCGGTTGCAGTTCATCTTGTATCACCTTAACCGCGTGCGAACCGAAAACGAATGGCTCCGGTCTGAGCGAACCGTGCTCCAGGAACGAATTTCCGAATATGCCCAAATTTTGGTTTTGCAACAATTGCAACCTTCTTTCTCCACTGCATGGAATTGCAATTTGACAGAATAA 540 0.537 MLSAILPSDPLLSNPFSAFAGGFTPPWDCHDDPLSDYLKPSTEPKPVTSSSGSGGPILTHEKRKPDPDEPDQSAEPVIDERKRRRMISNRESARRSRVRKQRHLENLRNQLNKCRMENRELNNRLQFILYHLNRVRTENEWLRSERTVLQERISEYAQILVLQQLQPSFSTAWNCNLTE* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3459 179 MobiDBLite consensus disorder prediction 30 99 - -
Lja4g3459 179 PANTHER BZIP TRANSCRIPTION FACTOR 44 31 177 - -
Lja4g3459 179 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 84 99 IPR004827 GO:0003700|GO:0006355
Lja4g3459 179 SUPERFAMILY Leucine zipper domain 81 129 IPR046347 GO:0003700|GO:0006355
Lja4g3459 179 MobiDBLite consensus disorder prediction 59 94 - -
Lja4g3459 179 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 79 142 IPR004827 GO:0003700|GO:0006355
Lja4g3459 179 PANTHER BZIP TRANSCRIPTION FACTOR 31 177 - -
Lja4g3459 179 SMART brlzneu 77 141 IPR004827 GO:0003700|GO:0006355
Lja4g3459 179 CDD bZIP_plant_GBF1 82 129 IPR045314 GO:0003700|GO:0006355
Lja4g3459 179 MobiDBLite consensus disorder prediction 42 56 - -
Lja4g3459 179 Gene3D - 79 132 - -
Lja4g3459 179 Coils Coil 90 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3459 Lja-Chr4 65257167 65258112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3459 4 166 bZIP Transcription Factor Family AT2G22850 35.407 2.83e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3459 - - ahf:112800711 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0229 2 2097653 2098560 Lja4g3459 4 65257167 65258112 PCT