Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3452 ATGTCATTCTATTCTAAAAGTTTCATGAGGTTATGTCTTTTAATCTGCATCGTTCTTATCTTGTCAAAGCCTGCAGTTTCTTCTAATATCATCAAGTCTTTGCCTGGGTTTCCTGGTACCCTTCCTTTTAAATTTGAAACTGGATACATTGGTGTTGGTAAGCATGAAGTGGCGCAATTGTTTTATTACTTTGTTGAATCAGAGAGAAATCCAACAGAGGATCCTCTGTTACTCTGGATGACTGGTGGCAACGGTTGCTCTGGCTTGTGCGGACTTTGGTTTGAAATAGGCCCACTGAAGTTTAATATGGTGAAGTATAATGGAACCATGCCATCATTTTCTCTCAATCCACACTCATGGACAAAGGTTTCTAGTATAATCTTTATTGATGCGCCGGTTGGCGCCGGATTCTCATATTCAAAAACCTTACAAGGGTCCAAGACAACAGACAAAATACATGCCCAACACTGTCACAGTTTCATGAGAAAGTGGTTGGCGCGTCATCCGAAATTTATTGATAATCCAGTCTACATTGCTGGTGACTCATATTCTGGCTTAACACTTCCAATTGTTGTCAAATATGTTATAGATGAAAACGAAGCTGGAGAAAAACCAAAGATAAATATAAAGGGATATGTACTTGGGAACCCAGTCACAGATCTAACATCAGATTGGAATTCAAGGATTCCATTTGCTCATCACATGGCTCTTATTTCTGATGAACTCTACAAGTCGGCAAAACTTTCATGCAGAGGGAAGTATGTGAAGGTGAAGAAAAGCAATGTACCATGTCAGAAGGTTCTCCAATCTATCTCAGAGAGAATCAGTAAAATAAATTTGCAACATATCTTAGAGCCTCTTTGTCCAGGTGACTTCAAATTTCAAGAACAAGTAGATGATCGGAGGGTTCTTCAAGAAAAATCCAGGGAGTTGTTGCTTTCTCCACTGCCAATCTTCAAATTTGGATGTAGGGGTTATGAGAATCTCTTGTTGCATGTATGGGCCAATGATGTTCATGTTCAAAAGGCCCTTCAAGTCCGCAAGGACACTGTGAAAGCTTGGAAAAGATGTAACGACAGCATAATTTACACAAATGATGTCCAAAGTTCTGTTGCCTATCACCAGTATCTCAGAATCAAACATTTCCGGGCTCTTATATACAGGTTCTACTACGACTTAAGCTTTATCATTTGA 1194 0.3936 MSFYSKSFMRLCLLICIVLILSKPAVSSNIIKSLPGFPGTLPFKFETGYIGVGKHEVAQLFYYFVESERNPTEDPLLLWMTGGNGCSGLCGLWFEIGPLKFNMVKYNGTMPSFSLNPHSWTKVSSIIFIDAPVGAGFSYSKTLQGSKTTDKIHAQHCHSFMRKWLARHPKFIDNPVYIAGDSYSGLTLPIVVKYVIDENEAGEKPKINIKGYVLGNPVTDLTSDWNSRIPFAHHMALISDELYKSAKLSCRGKYVKVKKSNVPCQKVLQSISERISKINLQHILEPLCPGDFKFQEQVDDRRVLQEKSRELLLSPLPIFKFGCRGYENLLLHVWANDVHVQKALQVRKDTVKAWKRCNDSIIYTNDVQSSVAYHQYLRIKHFRALIYRFYYDLSFII* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3452 397 SUPERFAMILY alpha/beta-Hydrolases 31 393 IPR029058 -
Lja4g3452 397 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 387 IPR001563 GO:0004185|GO:0006508
Lja4g3452 397 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Lja4g3452 397 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Lja4g3452 397 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Lja4g3452 397 Pfam Serine carboxypeptidase 35 392 IPR001563 GO:0004185|GO:0006508
Lja4g3452 397 Gene3D - 323 395 - -
Lja4g3452 397 PANTHER SERINE CARBOXYPEPTIDASE-LIKE PROTEIN 15 387 - -
Lja4g3452 397 Gene3D alpha/beta hydrolase 25 297 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3452 Lja-Chr4 65153715 65157884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3452 25 55 Calmodulin-binding Proteins AT2G22960 61.290 9.13e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3452 K16296 - tcc:18611311 444.506