Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3447 ATGTCATCAATGGAGCCAACCCTCTGTTCTTCTTCTTCTTCCATAACCCTTCCACACCCTCCCAACTTTTCTTCTCACAGATTCAATCTCAATCTCCACCCACAACAAGTAAACGTAACATCATGGGCATTAGCCAAGAGGGGTATCTCAATCTCAACCTCAACCTCCAAATCCAAAGGCTGCAACGTCTTCAGCGACGGCGTGGTTGATGCCGAGAGCCGCAGCTTCATGGAGGAGGATAAGCAATTCGTGCGTTGGTTTCGTGAGACATGGCCTTACTTGTGGGCTCATCGGGGTGCTACCTTTGTTGTCATCATTTCTGGTGAAATTGTTGCTAGTCCTTCCTTTGATCCCATTCTCAAGGATATAGCTTTCCTTCATCACCTTGGAATCCGGTTTGTCATTGTTCCAGGGACCCATGTGCAAATTGACAATCTTCTGCGTGAGAGAGGGAGCCAGCCTAAGTATGAAGGACCATATAGGATAACGGATGACGAATCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGACTGATGATTGAAGCAAAGCTTTCTCCTGGACCCTCCATTTGCAATATTCGTCGACATGGTGACAATAGCCGATGGCATGATGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTTGTCAAAGGAGTTGATTATGGGTCGACTGGGGAAGTTAAGAAAATAGATGTTCCACGCATGCGTGAGAGGCTTGATGGTGGTTGTATAGTTGTTTTAAGCAACCTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAATTCCTATGAAGTTGCCACAGCTTGTGCCTTGGCTATAGGTGCAGACAAGCTTATATGCATTATAGATGGTCCAATACTTGATGAGAGTGGACACCTTGTTCGTTTCTTGCCTCTTCAAGAAGCAGATATGCTAATTCGTAAGCGAGTTGAGCAAAGTGAAACAGCTGCTAATTATGTAAAAGCTGTTGATGAAGAAAGTTTCAAAACTCTTGGGTATAACTACTTTAATGGTGAGGTCCATTCTCCACAGAATGGAAAATCATTTTCAGAATGGCACAATGCAACCTTTCACAATGGTGTTGGTTTTGGCAATGGGAATGGCCTTTGGTCTGGTGAGCAAGGTTTTGCTATTGGAGGTCAGGAGTGGCTAAGTCGAATGAACGGTTACCTGTCAGAACTGGCTGCTGCAGCCTTTGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTCTGTTGTTGGAATTGTTCAAGAGAGATGGAATGGGAACAATGGTTGCTAGTGACCTTTATGAAGGCACCCGAATGGCTCAGGCAACAGATATTTCTGGAATAAAACAAATTCTCCAGCCTTTGGAAGAGAAAGGCGTATTGGTTAAGCGGACGGAAGAAGAGCTGCTTCATTCGTTGGGTTCCTTCATTGTTGTGGAAAGGGAAGGTCAAATAATTGCGTGTGCTGCACTTTTCCCTTTCTTTGAGGAGAACTGTGCAGAGGTTGCTGCAATTGCGGTATCTCCAGATTGCCGTGGCCAAGGACAGGGAGACAAATTGCTTGATTATATAGAGAAGAAGGCATCATCTGTTGGGTTCGACATGCTTTTCTTACTGACAACTCGTACAGCAGATTGGTTCGTGAGGCGTGGATTTTCAGAATGTTCAATAGATTATATACCTGAGAAGAAAAGAAAATCAATTAATCTATCCCGCAAGTCCAAGTACTATATGAAGAAGCTTCTACCTAACAAGAGTGGAATTACTGTTGATAGGAAACTTACTTCCTTTTAG 1836 0.4434 MSSMEPTLCSSSSSITLPHPPNFSSHRFNLNLHPQQVNVTSWALAKRGISISTSTSKSKGCNVFSDGVVDAESRSFMEEDKQFVRWFRETWPYLWAHRGATFVVIISGEIVASPSFDPILKDIAFLHHLGIRFVIVPGTHVQIDNLLRERGSQPKYEGPYRITDDESLAAAMEAAGRIRLMIEAKLSPGPSICNIRRHGDNSRWHDVGVSVASGNFLAAKRRGVVKGVDYGSTGEVKKIDVPRMRERLDGGCIVVLSNLGYSSSGEVLNCNSYEVATACALAIGADKLICIIDGPILDESGHLVRFLPLQEADMLIRKRVEQSETAANYVKAVDEESFKTLGYNYFNGEVHSPQNGKSFSEWHNATFHNGVGFGNGNGLWSGEQGFAIGGQEWLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQATDISGIKQILQPLEEKGVLVKRTEEELLHSLGSFIVVEREGQIIACAALFPFFEENCAEVAAIAVSPDCRGQGQGDKLLDYIEKKASSVGFDMLFLLTTRTADWFVRRGFSECSIDYIPEKKRKSINLSRKSKYYMKKLLPNKSGITVDRKLTSF* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3447 611 PANTHER AMINO-ACID ACETYLTRANSFERASE 53 602 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lja4g3447 611 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 452 599 IPR016181 -
Lja4g3447 611 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 404 595 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lja4g3447 611 Pfam Amino acid kinase family 102 321 IPR001048 -
Lja4g3447 611 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 449 597 IPR000182 GO:0016407
Lja4g3447 611 SUPERFAMILY Carbamate kinase-like 77 318 IPR036393 -
Lja4g3447 611 SUPERFAMILY Carbamate kinase-like 397 445 IPR036393 -
Lja4g3447 611 Gene3D - 81 448 IPR036393 -
Lja4g3447 611 Pfam Acetyltransferase (GNAT) family 484 554 IPR000182 GO:0016407
Lja4g3447 611 CDD AAK_NAGS-ABP 82 443 IPR033719 -
Lja4g3447 611 Gene3D - 449 595 - -
Lja4g3447 611 CDD NAT_SF 490 552 - -
Lja4g3447 611 Hamap Amino-acid acetyltransferase [argA]. 77 595 IPR010167 GO:0004042|GO:0005737|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3447 Lja-Chr4 65105350 65110759 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja4g3447 AA_kinase 2.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3447 K14682 - gmx:100800925 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0241 2 2222413 2230857 Lja4g3447 4 65105350 65110759 PCT