Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3434 ATGAAATTGAAACCTTATTTTTTGATCCTATTATCATTGTCTCTCTTCACTCCACTCAATAGTACTCCCAATGCAAGAAGAATCCTCCACCAACCGCTTTTCCCGGCGGGCTCCGCTCCGCCACCATCCACCCCTCCTCCGCCGCCACCAGACACTCCGTCGTCCCCCGACATCCCTTTCTTCAACGAGTACTCGCCACCGCCGCCGGACCAGGCCCTGACACAACCGCCGCCGTCGGCCTCAATTGCCTACCCGACGGCGACGAAACCGGCCAAGCCGGCAAAGAAAGTCGCAATTGCAGCCTCCGCGGCGGTTGTCACGGTGGCGGTTCTCTCCGCACTCGCGTTCTTCTTGTACAAGCACAGGGCCAATTCCAATTCAAATCAAACCTCCTCAGAGAATCACAAACTCGTTGTCGATGGTGGTGGTGGTCGTGGAAACTCTCGAAGGGTTCTAGATGATTCTCCGAGGGCCCCACCACCACCACCACCGTCGAGCTTCCTCTACATTGGAACTGTAGAGCCAAGCAGAACGTCGGTGAGCGACGCTCAAAATCTCAATTCTGCTAAGCTCGCTTCCAATTACCGTTACCGGCCGAGCCCCGAGCTGCAACCGTTGCCGCCGTTGAGCAAACCCCCCGACGAGATCCACTCGCCGCCGGCAGCTTCTTCTTCCTCGCCGTCTTCGTCGGAGGATGCAGAAAGCCGTGAGACGGCGTTTCATTCGCCGCACGGGTCGTCGGTGAGCCACGACGACAACAACTATTACACGCCGGTTTCGCGCCACAGCTCTGTCGCCAACGGTAGCCCCGCCGCGGCGACGGCGGTTCCGTTCTCGAAGAGGACTTCGCCGAAATCTCGGCTTTCTGCTTCGTCGCCGGATATCAGGCACGCCATGATTCCGTCCATTAAGCATAATCCCCTTCCTCCGCCGCCTGCGCCACCTGCGCCGCCGTCTACCCAATTGGACGGTGGTCCTTCCAGGAGGCCGAAATTTTCAACGCATCCTCTAGCGCCGAATATGGCTTCACTCAACACTCCTCCTCCTCCTCCTCCACCGCCACCGCCTCCGGCAGCAAGGAAGGTTTGGTCTCCGGCGATTACTACCATGCACTCGTCCTCTGTATCAAAGCAGCAACAATCTTCATCTTCAATTGAAGGAGATGCTTCTTCCAATGGTGTGAGTTCAGTGAGTGTGAGCAAACCTTCAGAGGAAGGTGAATCCATGATGGAAGGAGGAAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGCGTGCTACCTCAAACCGTGCCACTGTATGGAACCAGTTAAAATCAAGCTCATTTCAGTTAAATGAGGACATGATGGAGACCTTGTTTGGCTTCAATTCTACAACAAATTCTGCTCCTAAAGAGACAACAACAACAAGTGTTGTTAGAAAACCAGTTTTCCCCCCAGTTGAACAGGAGAATAGGGTGTTGGATCCCAAGAAATCACAAAACATTGCTATACTGCTCAGGGCACTGAATGTGACAAGAGATGAGGTATCAGAAGCTCTTTTAGATGGAAATCCTGAAGGGTTGGGTGCTGAGCTATTGGAAACACTAGTGAAGATGGCTCCAACAAAGGAGGAAGAGATAAAACTAAAAAATTACGACGGCGACCTTTCAAAACTTGGGTCTGCGGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTCTAGCTTTTAAAAGAGTTGAAGCCATGCTGTACAGAGCTAATTTTGAAACAGAAGTTAACTACCTTAGGAAATCCTTTCAGACCTTGGAGGCAGCAAGTGAGGAATTGAAAAACAGCCGGTTATTCTTCAAACTTCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGCACCAATCGCGGTGATGCTAAGTCTTTCAAACTAGACACACTCCTAAAACTAGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTACACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTACAGGTGGTGAATCTGCAAATGAGAGTGTTCAAAACCAAACGAATTCCCAATTCAATGAGGATGAGTTCAGAAAGAAAGGACTGCAGGTTGTGGCTGGACTGAGTAGAGACCTTGGTAATGTCAAAAAGGCAGCAGGAATGGACTCTGATGTCTTAAGCAGCTATGTATCAAAGCTTGAAATGGGGCTGGATAAAGTGAGATTGGTTTTGCAGTATCAAAAGCCAGATATGCAAGGAAGCTTCTTTAACGCGACAGAGATATTTCTGAAAGATGCTGAGGAGAAAATTATTGTGATCAAGGATGATGAGAGAAGGGCTTTGTTCCTTGTGAAAGAAGTTACAGAATACTTTCACGGGGATACGGCAAAAGAAGAAGTGCACCCTTTCAGAATTTTCATGATTGTAAGAGACTTTCTAAATATTCTTGATCAAGTATGCAAAGAAGTGGGAAGGATGCAGGATAGGACTGTGATCGGTTCAGCCAGATCATTCAGGATAGCTGCAAATGCATCATTACCGGTTCTCAACAGGTACCACGCAAGACAGGATAGAAGTTCAGATGAGGAAAGCTTATCTCCCTAG 2586 0.4907 MKLKPYFLILLSLSLFTPLNSTPNARRILHQPLFPAGSAPPPSTPPPPPPDTPSSPDIPFFNEYSPPPPDQALTQPPPSASIAYPTATKPAKPAKKVAIAASAAVVTVAVLSALAFFLYKHRANSNSNQTSSENHKLVVDGGGGRGNSRRVLDDSPRAPPPPPPSSFLYIGTVEPSRTSVSDAQNLNSAKLASNYRYRPSPELQPLPPLSKPPDEIHSPPAASSSSPSSSEDAESRETAFHSPHGSSVSHDDNNYYTPVSRHSSVANGSPAAATAVPFSKRTSPKSRLSASSPDIRHAMIPSIKHNPLPPPPAPPAPPSTQLDGGPSRRPKFSTHPLAPNMASLNTPPPPPPPPPPPAARKVWSPAITTMHSSSVSKQQQSSSSIEGDASSNGVSSVSVSKPSEEGESMMEGGKPKLKALHWDKVRATSNRATVWNQLKSSSFQLNEDMMETLFGFNSTTNSAPKETTTTSVVRKPVFPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKAVLDIPLAFKRVEAMLYRANFETEVNYLRKSFQTLEAASEELKNSRLFFKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGGESANESVQNQTNSQFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEMGLDKVRLVLQYQKPDMQGSFFNATEIFLKDAEEKIIVIKDDERRALFLVKEVTEYFHGDTAKEEVHPFRIFMIVRDFLNILDQVCKEVGRMQDRTVIGSARSFRIAANASLPVLNRYHARQDRSSDEESLSP* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3434 861 Gene3D Formin, FH2 domain 426 834 IPR042201 -
Lja4g3434 861 MobiDBLite consensus disorder prediction 35 75 - -
Lja4g3434 861 MobiDBLite consensus disorder prediction 342 361 - -
Lja4g3434 861 MobiDBLite consensus disorder prediction 240 270 - -
Lja4g3434 861 MobiDBLite consensus disorder prediction 304 321 - -
Lja4g3434 861 MobiDBLite consensus disorder prediction 219 233 - -
Lja4g3434 861 MobiDBLite consensus disorder prediction 191 414 - -
Lja4g3434 861 ProSiteProfiles Formin homology-2 (FH2) domain profile. 407 836 IPR015425 -
Lja4g3434 861 MobiDBLite consensus disorder prediction 366 403 - -
Lja4g3434 861 MobiDBLite consensus disorder prediction 32 86 - -
Lja4g3434 861 MobiDBLite consensus disorder prediction 125 170 - -
Lja4g3434 861 PANTHER FORMIN-LIKE PROTEIN 6 7 861 - -
Lja4g3434 861 SUPERFAMILY Formin homology 2 domain (FH2 domain) 347 822 - -
Lja4g3434 861 PANTHER FORMIN-RELATED 7 861 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lja4g3434 861 MobiDBLite consensus disorder prediction 201 215 - -
Lja4g3434 861 Pfam Formin Homology 2 Domain 414 810 IPR015425 -
Lja4g3434 861 SMART it6_source 407 825 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3434 Lja-Chr4 64989220 64994438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3434 360 851 FH2 protein (formin) Gene Family AT5G67470 68.283 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3434 - - gmx:100803578 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3434 4 64989220 64994438 Lja4g3434 4 64989220 64994438 ECH
Lja2g0261 2 2379053 2383978 Lja4g3434 4 64989220 64994438 PCT