Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3432 ATGGGAGAAGAGGCTTCTTCAACTGCCATGGTTCAAGTGAGTGTGAGAGAGTTTGATCCAAATAAAGACAGAGAAAGTGTGGAAGCTGTTGAAAGAATATGTGAGGTTGGACCCAGTGGGAAGCTTTCCCTCTTCACCGACCTCCATGGTGACCCAATTACCAGGGTCCGCAACTCACCAACTTTCCTCATGCTGGTGGCTGAGATTGGTGAAGAAACTGTTGGAATGATAAGAGGTTGCATCAAAACTGTTACATGTGGAAAAAAGCTTCAAAGGCTTGATAAAACCACAACCAAACAGGTCCCTGTTTACACCAAACTCGCCTACATTCTTGGCCTCCGTGTTTCTCCATTTCACAGGAGAATGGGAATTGCTTTGAAGCTAGTGCAAGCAATTGAGAAATGGTTCAGTGACAATGGAGCTGAGTACTCCTACATGGCAACTGAAAACGACAACGAAGCGTCTGTTAAGCTTTTCACTGAGAAATGTGGTTACTCAAAGTTCCGTACTCCTTCCATACTAGTGAACCCGGTCTTTGCTCACCGAGTTAGTACTAACTCGTCCCGGGTCACCATCATCCCACTCGCTCCGGCCGACGCGGAGTCACTCTACCGGAGCCGCTTCGCCACCACCGAGTTCTTCCCCAGAGACATTGACTCTGTCCTCAACAACAAACTCACCCTTGGCACGTTCCTCGCCGTGCCAAAGGACTGCCGGTACAGCCATGATACGTGGCAGGGCGCGGAGGAGTTTCTGTTGGACCCGCCGGGCTCGTGGGCTGTGGTGAGTGTGTGGAACAGTAAAGACATGTACACACTCGAGGTGAAAGGCGCGTCGAGGGTGAACCGGGCTTTGGCGAAAGCCACCCGGTTGGTGGACCGGGCTTTGCCGTGGCTGAAACTGCCTTCATTCCCGAACTTGTTCGAGCCGTTTGGGTTTCAATTGATGTACGGGCTTGGAGGGTTTGGCCCGGATGCGGTGACAATGGTGAGGGCTCTCTGTGGCCTAACACACAACCTTGCTAAAGAACAGGGTTGCCGTGTTGTGGCCACAGAGGTCTCGAGCACCGAACCACTACGATTCGGTGTCCCGCATTGGAAGATGCTATCATGCGAGGAGGATCTGTGGTGCATAAAAAGGCTTGGGGAGGATTATAGTGATGGTGCTGTTGGTGATTGGACCAAATCTCCACCTGGATTTTCCATTTTTGTTGACCCTAGAGAGTTTTAA 1230 0.5106 MGEEASSTAMVQVSVREFDPNKDRESVEAVERICEVGPSGKLSLFTDLHGDPITRVRNSPTFLMLVAEIGEETVGMIRGCIKTVTCGKKLQRLDKTTTKQVPVYTKLAYILGLRVSPFHRRMGIALKLVQAIEKWFSDNGAEYSYMATENDNEASVKLFTEKCGYSKFRTPSILVNPVFAHRVSTNSSRVTIIPLAPADAESLYRSRFATTEFFPRDIDSVLNNKLTLGTFLAVPKDCRYSHDTWQGAEEFLLDPPGSWAVVSVWNSKDMYTLEVKGASRVNRALAKATRLVDRALPWLKLPSFPNLFEPFGFQLMYGLGGFGPDAVTMVRALCGLTHNLAKEQGCRVVATEVSSTEPLRFGVPHWKMLSCEEDLWCIKRLGEDYSDGAVGDWTKSPPGFSIFVDPREF* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3432 409 Pfam Acetyltransferase (GNAT) family 58 165 IPR000182 GO:0016407
Lja4g3432 409 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 53 168 IPR016181 -
Lja4g3432 409 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 13 181 IPR000182 GO:0016407
Lja4g3432 409 Gene3D - 42 171 - -
Lja4g3432 409 PANTHER N-ACETYLTRANSFERASE 10 409 - -
Lja4g3432 409 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 10 409 - -
Lja4g3432 409 CDD NAT_SF 64 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3432 Lja-Chr4 64930418 64932394 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja4g3432 Acetyltransf_1 4.7e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3432 - - gmx:100775317 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3432 4 64930418 64932394 Lja4g3432 4 64930418 64932394 ECH
Lja2g0264 2 2446610 2448424 Lja4g3432 4 64930418 64932394 PCT