Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3431 ATGCTTTATATTGCAACTTTTTTACAAATAATTTTTTCCTTGACTCTCATTCCCAATTTAATGGCCATAAGGCCCTTCCACCACTTCAACTTGTTGTCGCGCGATAGATTGCTCTATCTCTTCCGCACGGCACAACAATTTCATTCTCCTCCTTCTTATCTTCTCCGCTCCCCCTCTTTCTCCCTCCGCCACTTCGCCGTCTCCGCCACCCCTGCTCCGCCGCAACCTCGCCGTCACCTCCCGCCGCCGCCCGACTCCATGGCGCAGAAGATTGGCAAATCCACTCGCCGCCCTGGCGCTTCCTCCAAAGCCAGGGTTTATGCCGATGTCAACGTCGTTCGCCCTAAGGAATATTGGGACTACGAAACCCTCACCGTTCAATGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGTAGGGGGAAATACAGTGAGGTATTTGAAGGTGTTCACTGCATTGATAATGAAAAATGTGTCATCAAGATCCTCAAACCTGTCAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGGCCTAATATTGTAAAGTTGCTTGACATTGTTAGAGACCAACAATCGAAGACCCCCAGTCTCATATTTGAATATGTCAATAACACTGATTTCAAAGTGCTTTATCCTACATTATCAGACTATGATATAAGATATTATATCTATGAACTTCTGAAGGCTCTGGACTATTGCCATTCACAAGGAATTATGCATCGGGATGTAAAGCCGCACAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGGAAAGAATATAATGTTCGTGTGGCTTCAAGATATTTCAAAGGTCCCGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTATGGAGTCTTGGTTGTATGTTTGCTGGGATGATATTCCGTAAGGAGCCATTCTTTTATGGGCATGATAACTATGATCAACTGGTCAAGATAGCTAAGGTACTTGGGACAGATGAATTAAGTGCATATTTAAATAAGTATCGAATAGAGTTGGACCCAAATCTTGCAGCACTTATTGGGAGGCATAGCCGGAAGCCATGGGCAAAGTTCATTAATGTAGAAAATCAACACTTGGCAGTTCCTGAGGCTGTGGACTTTGTTGACAAGTTGCTACGATATGATCACCAAGAACGCCCCACTGCTAAAGAAGCCATGGCACACCCTTACTTCAATCCAGTTCGAAGTGCAGAAAGTAGTAGAACTCGAACACATTGA 1302 0.4416 MLYIATFLQIIFSLTLIPNLMAIRPFHHFNLLSRDRLLYLFRTAQQFHSPPSYLLRSPSFSLRHFAVSATPAPPQPRRHLPPPPDSMAQKIGKSTRRPGASSKARVYADVNVVRPKEYWDYETLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCIDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELSAYLNKYRIELDPNLAALIGRHSRKPWAKFINVENQHLAVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPVRSAESSRTRTH* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3431 433 SUPERFAMILY Protein kinase-like (PK-like) 105 422 IPR011009 -
Lja4g3431 433 PANTHER BNAA04G13490D PROTEIN 85 425 - -
Lja4g3431 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Lja4g3431 433 MobiDBLite consensus disorder prediction 413 433 - -
Lja4g3431 433 MobiDBLite consensus disorder prediction 70 100 - -
Lja4g3431 433 Gene3D Phosphorylase Kinase; domain 1 134 210 - -
Lja4g3431 433 CDD STKc_CK2_alpha 115 419 IPR045216 GO:0004674|GO:0006468
Lja4g3431 433 PANTHER CASEIN KINASE II SUBUNIT ALPHA 85 425 IPR045216 GO:0004674|GO:0006468
Lja4g3431 433 SMART serkin_6 134 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3431 433 Gene3D Transferase(Phosphotransferase) domain 1 211 419 - -
Lja4g3431 433 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Lja4g3431 433 ProSiteProfiles Protein kinase domain profile. 134 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3431 433 Pfam Protein kinase domain 134 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3431 Lja-Chr4 64877847 64882830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3431 132 420 Core Cell Cycle Gene Families AT1G76540 31.013 5.86e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Lja4g3431 Pkinase 3.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3431 K03097 - gmx:100776388 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3431 4 64877847 64882830 Lja4g3431 4 64877847 64882830 ECH