Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3425 ATGGGTCAGATTAATCGTGTACTTGTGCTGTCACTCTCATTAACGCTGTGTTTTTACACTTGTTTTGCTCAGCTTAGCCCAAACCACTATGCTAGTACCTGCCCCAATCTTCAAAGCATCGTTAAAGGTGTTGTTCAGAAGAAATTTCAACAAACATTTGTTACAGTTCCTGCTACCCTTCGTCTCTTCTTTCACGATTGCTTTGTTCAGGGTTGTGATGCTTCTGTTATGGTGGCGTCTAGTGGGAATAACAAAGCAGAGAAGGATCACCCTGATAATCTGTCACTGGCGGGTGATGGGTTCGACACCGTGATCAAAGCGAAAGCCGCCGTGGACGCTGTTCCGCAGTGCAGGAACAAGGTTTCGTGTGCTGATATTCTCGCCTTGGCTACCCGGGATGTTGTTGTTCTGGCTGGTGGACCTTCCTACACTGTTGAATTGGGGAGATTTGATGGGCTAGTTTCAAGAGCTTCTGATGTAAATGGGAGGCTTCCTGAGCCAAACTTCAACTTGAACCAGCTTAATTCCCTATTTGCGTCACAAGGGCTCACCCAAACAGACATGATTGCACTCTCAGGTGCACATACCCTCGGATTCTCCCACTGCAACAGGTTCTCGAATAGAATATACAGCACCCCAGTGGACCCAACACTCAACAGGAACTACGCAACCCAGTTGCAACAAATGTGCCCCAAGAATGTGAACCCCCAGATCGCCATCAACATGGACCCTACGACTCCTCGAACATTCGACAACATTTACTACAAGAACCTTCAGCAAGGGAAGGGTCTCTTCACCTCTGATCAGATCCTCTTCACGGATCAACGGTCCAAGGCCACCGTTAATTCATTTGCTTCTAACAGCAACACCTTCAATGCCAACTTCGCGGCGGCCATGATCAAATTGGGTCGCGTCGGAGTTAAGACCGCCAGAAATGGGAAGATTCGTACTGATTGTTCAGTGCTTTAA 969 0.4778 MGQINRVLVLSLSLTLCFYTCFAQLSPNHYASTCPNLQSIVKGVVQKKFQQTFVTVPATLRLFFHDCFVQGCDASVMVASSGNNKAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILALATRDVVVLAGGPSYTVELGRFDGLVSRASDVNGRLPEPNFNLNQLNSLFASQGLTQTDMIALSGAHTLGFSHCNRFSNRIYSTPVDPTLNRNYATQLQQMCPKNVNPQIAINMDPTTPRTFDNIYYKNLQQGKGLFTSDQILFTDQRSKATVNSFASNSNTFNANFAAAMIKLGRVGVKTARNGKIRTDCSVL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3425 322 Gene3D - 28 321 - -
Lja4g3425 322 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 ProSiteProfiles Plant heme peroxidase family profile. 24 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Lja4g3425 322 Gene3D Peroxidase, domain 2 165 302 - -
Lja4g3425 322 SUPERFAMILY Heme-dependent peroxidases 24 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 CDD secretory_peroxidase 24 321 IPR033905 GO:0004601|GO:0042744
Lja4g3425 322 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Lja4g3425 322 PANTHER - 4 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 Pfam Peroxidase 42 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g3425 322 PANTHER PEROXIDASE 4 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3425 Lja-Chr4 64747023 64751082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3425 1 319 Peroxidase AT5G67400 68.615 5.94e-164 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3425 K00430 - gmx:100819937 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3425 4 64747023 64751082 Lja4g3425 4 64747023 64751082 ECH
Lja4g3425 4 64747023 64751082 Lja2g0269 2 2488889 2491525 PCT