Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3415 ATGGCTTCGTTTCACACTTCAACTCTCTTGGTTCTCTTTCTCAGTACTCTCTGCATCCATGCTACACCGGAGAACAAGGGTACTTACATAGTACACGTGGCTAAATCTGAAATGCCGGAGAGCTTCGAGCACCACGCGGCGTGGTACGAATCGTCGCTGCAATCTGTGTCTGATTCAGCTGAAATGCTCTACACCTACGACAACGCCATTCATGGATTCTCCACCAGGTTGACGCCGGAGGAAGCGCGTTTGCTGGAGGCGCAAACCGGGGTTCTGGCGGTGCTGCCGGAGAGGAAGTTTGAGCTTCATACAACCAGGACTCCTCTGTTCCTTGGCCTCGATAAGAGCGCTGACATGTTCCCTGCCTCTGGTGCTGGCGGCGAGGTTATTGTCGGTGTTCTCGACACCGGTGTCTGGCCGGAGAGCAAGAGCTTCGACGACACCGGGTTTGGACCAGTTCCCAGCACCTGGAAAGGTGAGTGCGAATCGGGTACGAATTTCACAGCGGCGAATTGCAACAAGAAGCTGATCGGAGCGAGGTACTTTTCAAAGGGCGCTGAAGCCATGTTGGGTCCGATTGATGAAACGGCGGAGTCTAAATCTCCACGTGACGACGACGGCCACGGCACCCACACCGCGAGCACCGCCGCGGGCTCGGTTGTTTCCGGGGCGAGTCTCTTCGGTTATGCTGCCGGAACGGCGCGTGGAATGGCCCCACACGCTAGAGTCGCGGCTTACAAGGTGTGCTGGAAGGGAGGTTGTTTCAGCTCCGACATCTTAGCCGCCATTGACAAAGCCATAGCGGATAACGTCAATGTTCTCTCCCTCTCCCTTGGCGGAGGCATGGCGGATTACTACAGAGACAGCGTCGCGATTGGAGCATTCGCTGCCATGGAGAAAGGTATCCTCGTGTCCTGCTCCGCCGGAAACGCAGGTCCCAGTGCCTACAGTCTCTCCAACGTGGCGCCATGGATCACCACCGTGGGAGCTGGCACACTAGACCGTGACTTCCCGGCGTTGGTTGAACTCGGGAACGGGCTAAACTACTCCGGCGTGTCACTCTACCGTGGCAACTCCTTACCGGATAATCCTCTACCGTTTGTCTACGCCGGAAACATCAGCAACACCACCAACGGGAACCTCTGCATGATGGGGACATTGTCACCGGACAAAGTCGCCGGGAAGATTGTCATGTGTGACAGAGGAATGAATGCTAGGGTGCAGAAAGGGCAGGTGGTGAAAGGCGCCGGAGGATTAGGCATGGTGCTAAGCAACACCGCCGCGAACGGCGAGGAATTGGTGGCTGATGCTCATCTTCTGCCGACTTCCGCCGTGGGTGAGAAAGCAGGTAACGCTATTAAAAAGTACCTATTCTCCGATCCAAAAGCGACGGTCAAGATTCTCTTTGAGGGAACAAAGGTGGGGATTCAGCCATCACCGGTGGTTGCAGCTTTCAGCTCCCGTGGTCCCAACTCCATCACACCGCAAATCTTGAAACCCGATCTGATCGCGCCAGGTGTCAACATCTTAGCGGGGTGGTCAAAAGCAGTGGGTCCTACCGGATTATCAGTAGACAACAGGCGCGTCGATTTCAACATAATCTCTGGCACTTCCATGTCCTGCCCTCACGTGAGTGGCTTAGCCGCGCTGATCAAGTCGGCTCACCCGGAATGGAGCCCAGCCGCTGTTAGATCAGCTCTCATGACCACGGCTTACACAGCTTACAAAAACGGAGAAAAGCTCCAAGACAGCGCAACAGGAAAACCCTCTACACCGTTCGATCATGGTGCTGGACACGTGGACCCTGTTGCAGCCGTTAACCCAGGTTTAGTCTACGATCTAACGGTGGATGATTATTTGAATTTCCTCTGCGCGCTGAACTACACAGCAACTGAGATAACAACCTTGGCAAGGAGGAAATTCCAGTGTGACGCGGGGAAGAAATACAGTGTGACCGAGCTTAACTACCCTTCGTTTGGTGTGGTGTTTGAGAGTGGGGCCAGTGTAGTTAAACACACGCGGAGTCTGAGTAACGTGGGGCCCGCGGGTACGTACAAGGCTTCCGTGACGAAAAATAACCCATCCGTGAAAGTCTCGATTGAGCCGCAAGTGTTGAGTTTCAAGGAGAGTGAGAAAAAATCGTATACGGTCACGTTCACGTCCTCGGGTTCTGCACCACAGAGGGTGAATGGGTTTGAACGGTTGGAATGGTCTGATGGGAAGAATGTGGTTGGAACACCTATCTCAATTAGTTGGGAATGA 2262 0.5433 MASFHTSTLLVLFLSTLCIHATPENKGTYIVHVAKSEMPESFEHHAAWYESSLQSVSDSAEMLYTYDNAIHGFSTRLTPEEARLLEAQTGVLAVLPERKFELHTTRTPLFLGLDKSADMFPASGAGGEVIVGVLDTGVWPESKSFDDTGFGPVPSTWKGECESGTNFTAANCNKKLIGARYFSKGAEAMLGPIDETAESKSPRDDDGHGTHTASTAAGSVVSGASLFGYAAGTARGMAPHARVAAYKVCWKGGCFSSDILAAIDKAIADNVNVLSLSLGGGMADYYRDSVAIGAFAAMEKGILVSCSAGNAGPSAYSLSNVAPWITTVGAGTLDRDFPALVELGNGLNYSGVSLYRGNSLPDNPLPFVYAGNISNTTNGNLCMMGTLSPDKVAGKIVMCDRGMNARVQKGQVVKGAGGLGMVLSNTAANGEELVADAHLLPTSAVGEKAGNAIKKYLFSDPKATVKILFEGTKVGIQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKAVGPTGLSVDNRRVDFNIISGTSMSCPHVSGLAALIKSAHPEWSPAAVRSALMTTAYTAYKNGEKLQDSATGKPSTPFDHGAGHVDPVAAVNPGLVYDLTVDDYLNFLCALNYTATEITTLARRKFQCDAGKKYSVTELNYPSFGVVFESGASVVKHTRSLSNVGPAGTYKASVTKNNPSVKVSIEPQVLSFKESEKKSYTVTFTSSGSAPQRVNGFERLEWSDGKNVVGTPISISWE* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3415 753 Gene3D Peptidase S8/S53 domain 129 619 IPR036852 GO:0004252|GO:0006508
Lja4g3415 753 Pfam Subtilase family 128 582 IPR000209 GO:0006508|GO:0008236
Lja4g3415 753 Pfam PA domain 390 453 IPR003137 -
Lja4g3415 753 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 19 751 - -
Lja4g3415 753 Gene3D - 334 475 - -
Lja4g3415 753 SUPERFAMILY Subtilisin-like 102 610 IPR036852 GO:0004252|GO:0006508
Lja4g3415 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 751 IPR045051 -
Lja4g3415 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 536 546 IPR023828 -
Lja4g3415 753 Pfam Fibronectin type-III domain 653 750 IPR041469 -
Lja4g3415 753 CDD Peptidases_S8_3 100 572 IPR034197 -
Lja4g3415 753 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Lja4g3415 753 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Lja4g3415 753 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Lja4g3415 753 CDD PA_subtilisin_like 341 467 - -
Lja4g3415 753 MobiDBLite consensus disorder prediction 196 215 - -
Lja4g3415 753 Gene3D - 623 752 - -
Lja4g3415 753 ProSiteProfiles Serine proteases, subtilase domain profile. 99 606 - -
Lja4g3415 753 Pfam Peptidase inhibitor I9 28 103 IPR010259 -
Lja4g3415 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 103 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3415 Lja-Chr4 64560327 64563265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3415 2 752 Subtilisin-like Serine Gene Family AT5G67360 71.258 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3415 - - gmx:100815413 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3415 4 64560327 64563265 Lja4g3415 4 64560327 64563265 ECH
Lja2g0281 2 2575648 2578122 Lja4g3415 4 64560327 64563265 PCT