Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3398 ATGATCCCATTTTTCTATTACATCTTCCTCTGTTTTCTTTTCATTTTCTCTCTCAAGTTTCTCTTCTCAAAACGAAACCTCCCTCCAGGTCCTCCATCTCTCCCCATAATTGGCAACCTCCACCAGCTCAAACACCCACTCCACCGCACCCTCCACCGCCTCTCACAAAAACACGGCAAAGTCTTCTCCCTCTGGTTCGGTTCCCGCTTCGTGGTGGTCGTTTCATCCCCAACCGTCGTCCAAGAATGCTTCACCAAAAACGACACCATCCTCGCGAACCGGCCACCGCTCCTCGCCGGCAAGCACATTGGCTACAACTTCACCACCGTGACGGCAGCACCTTACGGCGACCACTGGCGCAATCTCCGCCGCGTCATCTCGCTCGAGGTCCTCTCCACGCACCGCCTCAACACCTTCTACCGAATCAGGCGGGACGAGCCTCAGATGACGTTTAACACCATCATGAGAATGATCTCTGGGAAGAGGTACTGTGGCGATGATATTGATGTTGCTGATGTGGAACAAGCGAGGGAGTTTAGGGAACTCATGAATGAGATGGTGACACTAGCAGGGGCTAGTAACCCTGTTGAGTTTGTCAGGGTTCTTAGGTTGTTTGATTTTGGGAATTTGGAGAAGAGGATGAAGAGGATTGCTAGCAGGAATGATATCTTTTTGCAAGGACTCATTGATGAACATCGAATTGCGAAGCGGAGGAACAATAATGATCATAATACCATGATTGATCATCTCTTAAGTATGCAAGAATCACAACCTGAGTATTATACAGACCAAATCATCAAAGGAATTGTTCTGGTTATGCTCCTTGGAGGAACTGAGACATCAGCAACAACTTTAGAATGGGCAATGTCTGCTTTACTAAATCACCCAGAAGTGCTTAAAAAGGCAAGGGATGAAATAGACACTCACATTGGACAAGATCGCCTAGTGGAAGAATCAGACATTTCAAAACTTCCCTACCTACAGCATATAATCTCTGAGACATTTCGTTTACACCCTGCATTTCCACTGTTGTCACCCCATTTTTCTTCAAAAGATTGTACCATAGGAGGATATAATGTCCCACAGGGAACTATCTTGTTGGTTAATGCTTGGGCTATTCATAGAGATCCTCAGCTATGGAGTGATCCTGAACAGTTTAAGCCTGAGAGATTTGAGAAAGAAGGGGAAGCAGAGAAGGTGATTCCATTTGGGTTAGGAAGAAGGGCTTGTCCTGGAGCAGGATTGGGGCAGCGTACAGTAAGTTTAACTCTGGGTTTACTGATTCAATGTTTTGAGTGGAAACGAATGAGTGAGCAGGAAATTGACATGACTGAAGGAAAAGGGGTCACCATGCCGAAGCTAATTCCCTTAGAGGCCATGTGTAAAGCACGTCCAAATATAATCAACAAGGTTTCACTGATGTCTGATAGCAACTGA 1437 0.4607 MIPFFYYIFLCFLFIFSLKFLFSKRNLPPGPPSLPIIGNLHQLKHPLHRTLHRLSQKHGKVFSLWFGSRFVVVVSSPTVVQECFTKNDTILANRPPLLAGKHIGYNFTTVTAAPYGDHWRNLRRVISLEVLSTHRLNTFYRIRRDEPQMTFNTIMRMISGKRYCGDDIDVADVEQAREFRELMNEMVTLAGASNPVEFVRVLRLFDFGNLEKRMKRIASRNDIFLQGLIDEHRIAKRRNNNDHNTMIDHLLSMQESQPEYYTDQIIKGIVLVMLLGGTETSATTLEWAMSALLNHPEVLKKARDEIDTHIGQDRLVEESDISKLPYLQHIISETFRLHPAFPLLSPHFSSKDCTIGGYNVPQGTILLVNAWAIHRDPQLWSDPEQFKPERFEKEGEAEKVIPFGLGRRACPGAGLGQRTVSLTLGLLIQCFEWKRMSEQEIDMTEGKGVTMPKLIPLEAMCKARPNIINKVSLMSDSN* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3398 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 403 412 IPR017972 GO:0005506|GO:0016705
Lja4g3398 478 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 466 - -
Lja4g3398 478 SUPERFAMILY Cytochrome P450 28 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 Pfam Cytochrome P450 28 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PRINTS P450 superfamily signature 401 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 Gene3D Cytochrome P450 21 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 8 466 - -
Lja4g3398 478 PRINTS E-class P450 group I signature 328 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PRINTS E-class P450 group I signature 410 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3398 478 PRINTS E-class P450 group I signature 400 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3398 Lja-Chr4 64293041 64294822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3398 4 468 Cytochrome P450 AT4G37370 55.375 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3398 K13260 - gmx:100811727 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3398 4 64293041 64294822 Lja4g3398 4 64293041 64294822 ECH