Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3397 ATGGCAACTCTTCAGTTCCAGAGAATTCAACACTCTCTGTTCCTACTCACTTTTCTTCTTCAATTCTCATCACTCCAATTCCCTTCACTCGGGTACAATCTCCCCGATAACTACTTCATCAATTGCGGTTCCACCGCCGATGTAACCGACACCGAAACCCGCCGCGTCTACGCCGGCGAATCAAACCCTGCCTACCCAAAAACCACGTTTCGCAGCACCACCGTCGCAGAAAACAGTGTCTCACCGGCGCCGCCGTCTCCACTATACCAAACAGCAAGGATTTTCCGAAGCAATTCTTCTTACAAGTTCAACACAGAGACAAACAGAACCTACCTCCTCCGCCTCCACTTCTTCGCTTTCACCTCGCCGGAGAATCTTTCCGCCGCCAGGTTCAACGTCTCAGTTCCTGGATTCTGGCTGCTACCGAATTTCAACGCCGGAAACACCACAACCTCTGCTTCAGTTAAAGAGTATTTCCTCAAAATCACAAGCAAAACGTTCCGAATCACCTTCAGGCCTATCGGATCATCGTTCGCGTTTGTTAACGCCATAGAACTCTTCGTTCTCCCTCTCCATTTGATCTCAAACACAGTCTCACGTTTCACTCCTGGCACTGCAACTGCTAATCGAGGCCTATCTCCTTACACCGGTGGTTTGCTCTCTCGGGTGCTGGAGACTAAGCACAGGGTCAACGTTGGTGGTGAGAATGTCACGAGGGACACTGATAACTTACTGAGAAACTGGTCCCCAGATGATGGTCTTCTAAGTGTTCGACGAAATGCGCAGCCAAAGAGTTTCAGTAATCAAATTAAATATCGTGTAGATGATGACTCTGATGGTCCGAATTCGAGTTCATACACTGCGCCGAACGATGTCTATAGAACTGCTAGATTTATCAATTATAGCTCTGGTGGTGACTTGAACATAACTTGGGGTGTTCCGGTGGAGAAGAGTGAAGATCACCTGGTTCGGCTTCACTTCTGTGACATTTTTAATATTTTTCAGAATGGTTTTTCAATCTTCCAGCTGATGATTTACGACAACTTAGTCAGCAATGCAAATGATGGCGTAAATGTGTCGAGCGAGCTACAATCTCCTTATTATTACGACTTTGTGGTTCGCTCTGATGACTCTGGCCTCATGAAGATCAGTGTAAAGGTTAATGCGACTCAAACTGATCCGATTGCGTTTTTGAATGGGCTAGAGGTAATGAAAGTAATTGAGTCATCGGGTTCTGTTCCCTCGGATGATGAGGGTTCCAAGCATAATGTTCTTCCTGTGGTGCTGGGTTCCGCTCTTGGAGGTGTTTTTGTTCTGGTTTCTGTGGTGGTGGTTGGGTTTCTATATTGGCATCTTAAAATAAGGAAGCAAAAGCCTGTTGAGAATTCTGATTGGTCACCAATTCCGGTTAATGCTGGAGGAAGCTCTCACAGCAGGTTAACTGAGGGAACCATTCAAGGTTCACCACTTCCCAACATAAACCTTGGCCTGAAAATCTCCTTGCTTGAGATTCAATTTGCAACTAAGAATTTCGATGCGAAGCTGATGATTGGGAAGGGTGGTTTCGGTAATGTCTACAAGGGGGTTCTCAAGAATGGCATGAGTGTGGCTGTGAAAAGGAGTGATCCCGGGTCAGGTCAAGGCCTGCCAGAGTTTCAGACAGAGATCATGGTTTTGTCCAAGATTCGCCACAGGCACCTTGTTTCCTTAATTGGGTATTGTGATGAAAGGTATGAGATGATTCTGGTTTATGAGTACATGGAGAAAGGGACACTCAGGGACCATTTGTACAATACCAATTTCCCAAGCTTGTCTTGGAAGCAAAGGCTAGAAGTTTGCATTGGAGCTGCAAGGGGTCTTCATTACCTTCACAAAGGAGCATCTGGGGGAATCATTCACCGTGATGTGAAATCCACCAACATATTGCTTGATGAGAACCTTGTGGCTAAAGTTGCTGACTTTGGCCTTTCAAGAACAGGCCCTCTTGATGATCATCAATCATATGTCAGCACAGGTGTGAAAGGCACTTTCGGGTATCTTGATCCTGAGTATTTCAGGTCGCAGCAGCTGACAGAGAAATCTGATGTGTATTCATTTGGGGTGGTTCTTCTGGAAGTGTTGTGTGCAAGACCCGCCATTGAGCAATCGCTTCCAAGGGAGCAGGCAAACTTGGCTGAGTGGGGAATATTTTGCAAAAACAAAGGGATACTCGAAGAGATTGTTGATCCTGTCATCAAGGGGCAAATGGATCAAAACTCTCTCAGGAAATTCAGTGAGACAGTGGAGAAGTGCTTGCAAGAAGATGGTGGTGATAGGCCTTCAATGGGGGATGTGTTGTGGGACTTGGAGTACGCGCTGCAGCTTCAGCGAGGTACCATTCAAAGGGAGCCTCATGAGGATAGTTCTAGCAGTGCTTCTGCATCGATTCAATTGCCGAATGTTCGGCGTCTTCCTTCACTCTCCACGCTGAGTGAAGTGGATGACATGTCGATTGTGAGGGGTGATGAATCTGATAGTGCAGCTGATTCGGTTTTCTCTCAGTTGAGAATTGATGATGCTAGGTAG 2565 0.4647 MATLQFQRIQHSLFLLTFLLQFSSLQFPSLGYNLPDNYFINCGSTADVTDTETRRVYAGESNPAYPKTTFRSTTVAENSVSPAPPSPLYQTARIFRSNSSYKFNTETNRTYLLRLHFFAFTSPENLSAARFNVSVPGFWLLPNFNAGNTTTSASVKEYFLKITSKTFRITFRPIGSSFAFVNAIELFVLPLHLISNTVSRFTPGTATANRGLSPYTGGLLSRVLETKHRVNVGGENVTRDTDNLLRNWSPDDGLLSVRRNAQPKSFSNQIKYRVDDDSDGPNSSSYTAPNDVYRTARFINYSSGGDLNITWGVPVEKSEDHLVRLHFCDIFNIFQNGFSIFQLMIYDNLVSNANDGVNVSSELQSPYYYDFVVRSDDSGLMKISVKVNATQTDPIAFLNGLEVMKVIESSGSVPSDDEGSKHNVLPVVLGSALGGVFVLVSVVVVGFLYWHLKIRKQKPVENSDWSPIPVNAGGSSHSRLTEGTIQGSPLPNINLGLKISLLEIQFATKNFDAKLMIGKGGFGNVYKGVLKNGMSVAVKRSDPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLRDHLYNTNFPSLSWKQRLEVCIGAARGLHYLHKGASGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDDHQSYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIEQSLPREQANLAEWGIFCKNKGILEEIVDPVIKGQMDQNSLRKFSETVEKCLQEDGGDRPSMGDVLWDLEYALQLQRGTIQREPHEDSSSSASASIQLPNVRRLPSLSTLSEVDDMSIVRGDESDSAADSVFSQLRIDDAR* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3397 854 Gene3D Transferase(Phosphotransferase) domain 1 587 808 - -
Lja4g3397 854 SMART serkin_6 511 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3397 854 Gene3D Phosphorylase Kinase; domain 1 480 586 - -
Lja4g3397 854 Gene3D - 224 407 - -
Lja4g3397 854 Gene3D - 37 188 - -
Lja4g3397 854 Pfam Malectin-like domain 40 406 IPR024788 -
Lja4g3397 854 PANTHER OS07G0166700 PROTEIN 29 816 IPR045272 GO:0004714|GO:0006468
Lja4g3397 854 PANTHER BNAC03G27170D PROTEIN 29 816 - -
Lja4g3397 854 Pfam Protein tyrosine and serine/threonine kinase 516 779 IPR001245 GO:0004672|GO:0006468
Lja4g3397 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Lja4g3397 854 SUPERFAMILY Protein kinase-like (PK-like) 495 783 IPR011009 -
Lja4g3397 854 ProSiteProfiles Protein kinase domain profile. 511 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3397 854 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Lja4g3397 854 CDD STKc_IRAK 517 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3397 Lja-Chr4 64287700 64290704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3397 32 854 Receptor kinase-like Gene Family AT2G23200 45.335 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja4g3397 Malectin_like 2.5e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3397 - - adu:107480521 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3397 4 64287700 64290704 Lja4g3397 4 64287700 64290704 ECH