Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3396 ATGGCAACTCTTCAGTTCCAGAGAATTCAACACTCTCTGTTCCTACTCACTTTTCTTCTTCAATTCTCATCACTCCAATTCCCTTCACTCGGGTACAATCTCCCCGATAACTACTTCATCAATTGCGGTTCCACCGCCGATGTAACCGACACCGAAACCCGCCGCGTCTACGCCGGCGAATCAAACCCTGCCTACCCAAAAACCACGTTTCGCAGCACCACCGTCGCAGAAAACAGTGTCTCACCGGCGCCGCCGTCTCCACTATACCAAACAGCAAGGATTTTCCGAAGCAATTCTTCTTACAAGTTCAACACAGAGACAAACAGAACCTACCTCCTCCGCCTCCACTTCTTCGCTTTCACCTCGCCGGAGAATCTTTCCGCCGCCAGGTTCAACGTCTCAGTTCCTGGATTCTGGCTGCTACCGAACTTCAACTCCGGAAACACCTCATCATCTGCTTCAGTTCAAGAGTATTTCCTCAAAATCACAAGCAAAACGTTCCGAATCACCTTCAGGCCTATCGGATCATCGTTCGCGTTTGTTAACGCCATAGAACTCTTCGTTCTCCCTCTCCAATTGATCTCAAACGCAGTGTCACGTTTCACTCCTGGCACTGCAACTGTTAATCAAGGCCTATCTCCTTACACCGGTGGTTTTCTCTCTCGGGTGCTGGAGACTAAGCACAGGGTCAACGTTGGTGGCGGGAATGTCACGAGGGACACTGATAACTTACTGAGAAACTGGTCCCCAGATGATGGTCTTCTTAGTGTTCGACGAAATGCGCAGCCGAAGAGTTTCAGTAATCAAATTAAGTATCGTGTAGATGATGACTCTGATGGTCCGAATTCGAGTCAATACACTGCGCCAAACGATGTCTATAGAACTGCTAGATTTATCAATTATAGCTCCGGCGGTGACTTGAACATAACTTGGAGTGTTCCGGTGGAGACGAGTGCAGATCACCTGGTACGGCTTCACTTCTGTGACATTTTTAATATTGGTAAGAATGGTTTGTCAATCTTCCAGCTGATGATTTACGACAACTTAGTCAGCAATGCAAATGATGGCGTAAATGTGTTGAGCGAGCTACAATCTCCTTATTATTACGACTTTGTGGTTCGCTCTGATGACTCTGGCCTCATGAAGATCAGTGTAATGGTTAATGCGACTCAAATTGATCCGATTGCGTTTTTGAATGGGCTAGAGGTAATGAAAGTAATTGAGTCATCGGGTTCTGTTCCCTCGGATGATGAGGGTTCCAAGCATAATGTTCTTCCTGTGGTGCTGGGTTCAGCTCTTGGAGGTGTTTTTGTTCTAGTTTCTGTGGTGGTGGTTGGGTTTCTCTGTTGGCATCTTAAAATCAGGAAACAAAAGGGAACAGTTCAAGGGTCCCCAATTCTCGACTTAAACCTTGGCCTGAAATTTTCCTTGCTTGAGATTCAATGGGCAACTGAGAATTTCGATGCAAAGCATATTATAGGCAAGGGTGGTTTTGGCGACGTCTACAAGGGGGTTCTCAAGAATGGCCTCCGTGTGGCTGTGAAAAGAAGTAAACCCGGGTCAGGTCAAGGCCTTCTCGAGTTTCGAACAGAGATCATGGTTTTGTCCAAGATTCACCACAGGCACCTTGTTTCCTTGATTGGGTATTGTGATGAAAAGTATGAGATGATTCTGGTTTATGAGTACATGGAGAAAGGGACTCTCAGGGACCATTTATACAACACGAATTTCCCAAGCTTGTTTTGGAAGCAGAGGCTTGAAATTTGCATTGGAGCTGCAAGGGGTCTTCATTACCTTCACAAAGGAGTTTATGGTGGAATCATTCACCGTGATGTGAAATCCACTAACATATTGCTTGATGAGAACCTTGTGGCTAAAGTTGCTGACTTTGGCCTTTCAAGAACAGGTCCTCTTGATGATCACCAGTCATATGTCATCACAGATGTAAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTCAGGTCGCAACAGCTGACGGAAAAATCTGATGTATATTCATTTGGGGTGGTTCTTCTTGAAGTGTTGTGTGCAAGACCAGCCATTGAATCTTCATTTCCGAGGGAGCAAGTGAACTTAGCTGAGTGGGGAATGCTTTGCAAAAACAAAGGGATGTTAGGCGAGATTGTTGATCCTGCCATAAAGGGCCAGATAGATCAAAACTCTCTCAAGAAATTCAGTGACACGGTGGAAAAGTGCTTGCAAGAAAATGGTTGTGATAGGCCTACAATGCGGGATGTGTTGTGGGACTTGGAGTATGCACTGCAACTTTACAATACAATGAGAGCTCTTGAGGATAGTTCAAGCAGTGCTTCTGCATCTCTTCAATTTCATAATATTTTGTTAGGTGGTTCTTCCTAG 2382 0.4534 MATLQFQRIQHSLFLLTFLLQFSSLQFPSLGYNLPDNYFINCGSTADVTDTETRRVYAGESNPAYPKTTFRSTTVAENSVSPAPPSPLYQTARIFRSNSSYKFNTETNRTYLLRLHFFAFTSPENLSAARFNVSVPGFWLLPNFNSGNTSSSASVQEYFLKITSKTFRITFRPIGSSFAFVNAIELFVLPLQLISNAVSRFTPGTATVNQGLSPYTGGFLSRVLETKHRVNVGGGNVTRDTDNLLRNWSPDDGLLSVRRNAQPKSFSNQIKYRVDDDSDGPNSSQYTAPNDVYRTARFINYSSGGDLNITWSVPVETSADHLVRLHFCDIFNIGKNGLSIFQLMIYDNLVSNANDGVNVLSELQSPYYYDFVVRSDDSGLMKISVMVNATQIDPIAFLNGLEVMKVIESSGSVPSDDEGSKHNVLPVVLGSALGGVFVLVSVVVVGFLCWHLKIRKQKGTVQGSPILDLNLGLKFSLLEIQWATENFDAKHIIGKGGFGDVYKGVLKNGLRVAVKRSKPGSGQGLLEFRTEIMVLSKIHHRHLVSLIGYCDEKYEMILVYEYMEKGTLRDHLYNTNFPSLFWKQRLEICIGAARGLHYLHKGVYGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDDHQSYVITDVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIESSFPREQVNLAEWGMLCKNKGMLGEIVDPAIKGQIDQNSLKKFSDTVEKCLQENGCDRPTMRDVLWDLEYALQLYNTMRALEDSSSSASASLQFHNILLGGSS* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3396 793 SMART serkin_6 487 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3396 793 Gene3D - 224 407 - -
Lja4g3396 793 Gene3D - 37 188 - -
Lja4g3396 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Lja4g3396 793 PANTHER BNAC03G27170D PROTEIN 29 773 - -
Lja4g3396 793 PANTHER OS07G0166700 PROTEIN 29 773 IPR045272 GO:0004714|GO:0006468
Lja4g3396 793 Gene3D Phosphorylase Kinase; domain 1 452 562 - -
Lja4g3396 793 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Lja4g3396 793 CDD STKc_IRAK 493 759 - -
Lja4g3396 793 ProSiteProfiles Protein kinase domain profile. 487 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3396 793 Pfam Protein tyrosine and serine/threonine kinase 490 755 IPR001245 GO:0004672|GO:0006468
Lja4g3396 793 Gene3D Transferase(Phosphotransferase) domain 1 563 781 - -
Lja4g3396 793 Pfam Malectin-like domain 40 406 IPR024788 -
Lja4g3396 793 SUPERFAMILY Protein kinase-like (PK-like) 474 756 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3396 Lja-Chr4 64283805 64287468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3396 32 780 Receptor kinase-like Gene Family AT2G23200 44.076 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja4g3396 Malectin_like 6.4e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3396 - - lja:Lj0g3v0151929.1 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3396 4 64283805 64287468 Lja4g3396 4 64283805 64287468 ECH