Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3383 ATGAGAAGAAGCAACTCAACTTCTAGTCTCAGTTATCCATGGTGGAAGAACGTTCTTGCACTCGTGCTTCTGATACTAGCTACCATTAACCAATGTTGTGGTTTGAACAGAGACGGTGTCCTGTTACTTTCCTTCAAATATTCCATCCTCAACGACGCTCTTTTCGTTCTCAGAACCTGGAATTACAGCGATGAAACTCCATGTTCATGGAATGGAGTTGCTTGTTCCCCAATTCAAACCACAACAAATGGTACAGAGTTTCGTGTGACATCTTTGTCCTTACCGAATTCTCAGCTTCTGGGTTCTCTTCCTTCCGATCTGGGTTCCATTGATCACCTTCAAATTCTCAACCTTGCCAACAATTCCCTTAATGGGTCTCTTCCTTCTTCGCTTTTCCAATCCTCCTCAGAGCTTCAGCTCCTCAATTTATACAATAACCTCATAACAGGGGAGGTTCCAGAATCCATAGTAGAGCTTCGGAACCTTCAGATTCTGAACCTCTCTGACAATGCCTTAACCGGAAAAGTGCCTGAAAATCTCTCAAACATGCAGAACCTAACTGTGGCTTCACTCAGAAACAACTACCTATCGGGTTTTCTCCCTCACGGGTTGCAGAACTTGCAGGTTTTGGATCTTTCTTCCAATTTGTTGAACGGGACTCTGCCTCCAGATTTCGGCGGAGACGCCGTGCGGTACTTGAACATCTCGTACAACAGATTTTCCGGGAAAATCCCACCGGAGTTCGCCGCGAAAATACCCACCAACGCAACGGTTGATCTCTCGTTCAACAACTTCACCGGCGAGGTTCCTGATTCCCCTGTTTTTCTAAACCAAGAAACAGAGTCGTTCACCGGAAACATCGATCTCTGCGGTGAACCAACCAGGAACGTGTGCCCCATTCCTTCATCACCATCCTCTGAACCCAAACCTTCTCCTACCTCTCCTCCTGCAATCGCAGCCATCCCCAAGACGTTTGATTCTCCTCCCCTGTCACCAACAGGGTCAACTTCCTCTCAGCAAAAACAGAGCGGGCTCAGAAGAGGTACCATCATCGGAATCGTCATCGGAGATGTCATCGGAATCGGAATCCTAGCCATGGTTTTCATCTACGTGTACAAACTGAAGAGAAAAAAGAGCTTAAACAGTGCAATCAAGAACGAAGCAGCAATAGCAAGGAGCGAGAGTTCATCAACAACCTCAGAGTCAAAAGGGTTCACACGGTGGTCGTGTCTCCGCAAAAGGGCAGAAGAGGAAGAATCATCAGAAACACCGTGCTCTTCCGACGGTGAAGCTGAACCACCACGCGACGGCAGCGCCGACAATAATCAGAATCAGAAGCCATTACAAGAGAACAAAACGGGCACTCTGGTGACCGTCGACGGCGAGAAGCAGCTTGAAGTTGAAACGCTGCTGAAAGCGTCGGCGTTTATACTCGGCGCCACCGGTTCAAGCATCATGTACAAGGCGGTTCTCGAAGACGGCACGTCGTTAGCGGTTCGGAGAATCGGCGAGAGCGGCGTGGAGCGGTTCAAGGACTTCGAGAACACGGTTCGAGTCATCGCGAAACTGGTTCACCCGAACCTGGTTCGGGTTCGTGGGTTCTACTGGGGTCACGATGAGAAGCTCATCATCTATGACTTCGTTCCCAATGGCTGCCTCGCCAACGTTCGTTACAGGAAGGTGGGGTCCTCACCTAGCCACTTACCGTGGGAAATCCGGCTCAAGATAGCAAAAGGGGTGGCACGTGGGCTGACTTACCTCCACGAGAAGAAGCACGTGCATGGAAACTTGAAGCCCAGCAATATTCTATTGGGCAACGACATGGAGCCCAAGATTGGAGACTTTGGGCTTGAACGGATTGTGACAGGTGACACCAGTTATAAAGCAGGAGGGTCAGCCCGTATTTTCGGGAGCAAGAGGTCCACAGCCTCCCGCGACAGCTTCCAAGATGTCACGTTTGGGCCGAGCCCGAGTCCAAGCCCGAGCTCGATTAGCGGGGTGTCGCCTTACAGTGCGCCTGAGTCGCTTAGGAATCTGAAGCCTCACCCGAAGTGGGATGTGTACTCGTTTGGGGTCTTGTTTCTAGAGCTGCTAACGGGGAAGGTTGTGGTTTTGGATGATATGAGCCAAGCTGGGCCTGGGCTTTTGGTTGAGGATCAAAACCGGGCTTTGCGGATGGTTGACGTGACTATCCGGGCTGACATGGAGGGTAAAGAGGAGGCCCTCTTGGCCTACTTCAAGCTAGGGTACAGTTGTGTGTGTGGCGTTCCGCAAAAAAGACCACAAATGAAAGAGGTGCTACAAATTCTTGAAAAGACCCCATCTTCTTCGCCTTCTTCATTTTCGTATTATTATAGCCACTAA 2364 0.5 MRRSNSTSSLSYPWWKNVLALVLLILATINQCCGLNRDGVLLLSFKYSILNDALFVLRTWNYSDETPCSWNGVACSPIQTTTNGTEFRVTSLSLPNSQLLGSLPSDLGSIDHLQILNLANNSLNGSLPSSLFQSSSELQLLNLYNNLITGEVPESIVELRNLQILNLSDNALTGKVPENLSNMQNLTVASLRNNYLSGFLPHGLQNLQVLDLSSNLLNGTLPPDFGGDAVRYLNISYNRFSGKIPPEFAAKIPTNATVDLSFNNFTGEVPDSPVFLNQETESFTGNIDLCGEPTRNVCPIPSSPSSEPKPSPTSPPAIAAIPKTFDSPPLSPTGSTSSQQKQSGLRRGTIIGIVIGDVIGIGILAMVFIYVYKLKRKKSLNSAIKNEAAIARSESSSTTSESKGFTRWSCLRKRAEEEESSETPCSSDGEAEPPRDGSADNNQNQKPLQENKTGTLVTVDGEKQLEVETLLKASAFILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENTVRVIAKLVHPNLVRVRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPSHLPWEIRLKIAKGVARGLTYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDVTFGPSPSPSPSSISGVSPYSAPESLRNLKPHPKWDVYSFGVLFLELLTGKVVVLDDMSQAGPGLLVEDQNRALRMVDVTIRADMEGKEEALLAYFKLGYSCVCGVPQKRPQMKEVLQILEKTPSSSPSSFSYYYSH* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3383 787 MobiDBLite consensus disorder prediction 437 455 - -
Lja4g3383 787 Gene3D Phosphorylase Kinase; domain 1 439 547 - -
Lja4g3383 787 MobiDBLite consensus disorder prediction 303 317 - -
Lja4g3383 787 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 22 776 - -
Lja4g3383 787 PANTHER BNAC07G16060D PROTEIN 22 776 - -
Lja4g3383 787 Gene3D Ribonuclease Inhibitor 204 300 IPR032675 -
Lja4g3383 787 ProSiteProfiles Protein kinase domain profile. 472 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g3383 787 Pfam Leucine Rich Repeat 206 226 IPR001611 GO:0005515
Lja4g3383 787 Gene3D Ribonuclease Inhibitor 35 203 IPR032675 -
Lja4g3383 787 SMART LRR_typ_2 159 183 IPR003591 -
Lja4g3383 787 SMART LRR_typ_2 110 134 IPR003591 -
Lja4g3383 787 SMART LRR_typ_2 204 227 IPR003591 -
Lja4g3383 787 Gene3D Transferase(Phosphotransferase) domain 1 549 782 - -
Lja4g3383 787 MobiDBLite consensus disorder prediction 646 673 - -
Lja4g3383 787 MobiDBLite consensus disorder prediction 388 406 - -
Lja4g3383 787 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Lja4g3383 787 SUPERFAMILY L domain-like 36 294 - -
Lja4g3383 787 MobiDBLite consensus disorder prediction 294 344 - -
Lja4g3383 787 SUPERFAMILY Protein kinase-like (PK-like) 477 776 IPR011009 -
Lja4g3383 787 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Lja4g3383 787 MobiDBLite consensus disorder prediction 413 455 - -
Lja4g3383 787 MobiDBLite consensus disorder prediction 328 344 - -
Lja4g3383 787 MobiDBLite consensus disorder prediction 388 407 - -
Lja4g3383 787 MobiDBLite consensus disorder prediction 646 672 - -
Lja4g3383 787 Pfam Protein kinase domain 478 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3383 Lja-Chr4 63983912 63987630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3383 18 787 Receptor kinase-like Gene Family AT4G37250 56.962 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja4g3383 Pkinase 6.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3383 - - gmx:100784503 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3383 4 63983912 63987630 Lja4g3383 4 63983912 63987630 ECH