Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3361 ATGGCAGACACACGAATCATCTCAACTACCACAGTCCAAGCAACAAATCACAACAGCTCAACCCCGATAATCCATTTAACCCCATGGGATCTCCTACTACTCAACCTTGAATCAATCCAACAAGGTCTCCTTTTCCACAAACCCAAAACAGACCACCAAATCCACCACCTCAAACACACCCTTTCCACCATTCTCACCTTCTTCCCACCTTTCACCGGCCGCCTCATCATCACAAACCACCACGACAACAACAACAACACCACCGTCACCTGTCACATCACATGCAACAACGCCGGCGCACTGTTCGTCCACGCCGCCGCAGAAAAAACCTCCATCGCCGACATCATCCGACCCGGGTACGTTCCTTCCATTGTCCACTCATTCTTCCCACTGAACGGAGTTAAAAACTACCAAGGCATGTCGCAGCCGTTGCTGGCGGTGCAGGTGACGGAGCTTCTCGACGGCGTCTTCATCGGCTTCACAATGAACCACTCTGTCGCTGACGGCAAGGCGTTTTGGCAATTCATCAATTCCTGGGGTGAACTCTCTCGTGGTAATTCAGATAAACTAATGAAAACCCCTCCACTTGAACGTTGGTTTCCAAACGGCATCGACCCTCCAATACACTTTCCAAGTTTCACAAAGGAAGAGGAGAAGAAGAAGCAAGATAACAGTGACCCTGTTCCGCAATTGCCACCTCTTTGCATCTTCCATTTCTCAAAAGAGAAACTCGCAGAGCTGAAAGCAAAAGCAAATGCAGAGGTTGACAATGGCATGCACGAAAACAGAGTAATATCTTCCTTGCAAGCACTTTTGACTCACATTTGGCGTTCTGTGATCCGTGCTCAACGTGTTAACCCAGAAAAGGAGACTGATTACATGTTAATCATTGATGCAAGGCAGAGAATGCAGCCACCGCTGCCGGAGAATTATCTCGGAAACGCAGGAATGGCAGGCATTGTCAAATTGAAAGCAGGGGAATTGTTGTTGGAGGGAAAGAGTGCTTGGGAAATGAACAAGATGATTGCATTGCACACTGATGAGATGATGAGGAGTAACTATGAGGGTTGGTTGAAAACTCCGGTTCTGATAACGCCGGCGGCTAAGGCTGCCGCCGGTGATACGGTGTCGTTTATCACCAATAGTTCACCGAGGTTCGATTTTTATGGTAATGATTTTGGTTGGGGGAAGCCTGTGGCGGTTCGGAATGGTGCTGCGAATAAATATAGTGGTAAAATTACTGCATTTGGAGGGGTTGAAGAAGGTAGTATTGATCTTGAAGTGTGCCTTCGTTTTGAGACTTTGGAGGCCATGAAAAATGACCCTGTTTTCATGGATGCTGTGTCCATGTAA 1353 0.4767 MADTRIISTTTVQATNHNSSTPIIHLTPWDLLLLNLESIQQGLLFHKPKTDHQIHHLKHTLSTILTFFPPFTGRLIITNHHDNNNNTTVTCHITCNNAGALFVHAAAEKTSIADIIRPGYVPSIVHSFFPLNGVKNYQGMSQPLLAVQVTELLDGVFIGFTMNHSVADGKAFWQFINSWGELSRGNSDKLMKTPPLERWFPNGIDPPIHFPSFTKEEEKKKQDNSDPVPQLPPLCIFHFSKEKLAELKAKANAEVDNGMHENRVISSLQALLTHIWRSVIRAQRVNPEKETDYMLIIDARQRMQPPLPENYLGNAGMAGIVKLKAGELLLEGKSAWEMNKMIALHTDEMMRSNYEGWLKTPVLITPAAKAAAGDTVSFITNSSPRFDFYGNDFGWGKPVAVRNGAANKYSGKITAFGGVEEGSIDLEVCLRFETLEAMKNDPVFMDAVSM* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3361 450 Gene3D - 4 224 IPR023213 -
Lja4g3361 450 Pfam Transferase family 6 443 - -
Lja4g3361 450 Gene3D - 234 441 IPR023213 -
Lja4g3361 450 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 447 - -
Lja4g3361 450 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3361 Lja-Chr4 63461988 63463695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3361 57 436 Monolignol Biosynthesis Gene Families AT5G48930 28.244 2.42e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3361 - - lja:Lj0g3v0129489.1 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3361 4 63461988 63463695 Lja4g3361 4 63461988 63463695 ECH