Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3359 ATGGCTGCCAATAACGGAGAGGAACAACAGCAAAATCAACTCATCGGCCACCAAGATCTAGCTCATAAGAGTCTCCTTCAGAGTGATGCACTCTATCAGTATATACTTGAAACCAGTGTGTTTCCCAGAGAGCATGAAAGCTTGAAGGAGCTTCGTGAGATGACAGAAAAACACCCTCGGAACCTGATGGCTACACCACCTGATGAAGGACAACTATTGAGGATGTTGATTAAACTCATCAATGCCAAGAACACCATGGAAATTGGTGTCTACACTGGTTACTCTCTGCTTTCCACTGCTCTTGCTCTTCCTGAAGATGGAAAGATCTTGGCTTTGGATGTGAACCGTGAATACTATGAATTGGGATTACCCATAATTGAGAAAGCTGGAGTTGCTCACAAGATTGATTTCAGAGAAGGACCAGCTCTTCCTCTTCTTGATGAACTGCTAGAGGATGAAAATAATAAGGGAACATTTGATTTCATTTTTGTGGATGCTGATAAGGATAACTACATAAACTATCACAAGAGGGTGATTGAGCTTGTGAAGGTTGGGGGTCTAATTGGGTTCGATAACACCTTGTGGTTTGGGTCTATGGTGGCTGCACCAGACGCACCTATGATGGATTTTGTGAAGCACTATCGTGGTTATGTGATTGAGCTCAACAAATATTTAGCTCATGATTCAAGGATTGAGATTTGCCAGCTCCCCGTTGGTGATGGGATTACCCTGTGCCGCCGCATCATTTGA 750 0.4347 MAANNGEEQQQNQLIGHQDLAHKSLLQSDALYQYILETSVFPREHESLKELREMTEKHPRNLMATPPDEGQLLRMLIKLINAKNTMEIGVYTGYSLLSTALALPEDGKILALDVNREYYELGLPIIEKAGVAHKIDFREGPALPLLDELLEDENNKGTFDFIFVDADKDNYINYHKRVIELVKVGGLIGFDNTLWFGSMVAAPDAPMMDFVKHYRGYVIELNKYLAHDSRIEICQLPVGDGITLCRRII* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3359 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 247 IPR029063 -
Lja4g3359 249 PANTHER O-METHYLTRANSFERASE-RELATED 5 249 - -
Lja4g3359 249 CDD AdoMet_MTases 87 188 - -
Lja4g3359 249 Pfam O-methyltransferase 38 248 IPR002935 GO:0008171
Lja4g3359 249 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 5 249 - -
Lja4g3359 249 Gene3D Vaccinia Virus protein VP39 14 249 IPR029063 -
Lja4g3359 249 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 248 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3359 Lja-Chr4 63441542 63443267 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3359 5 248 Monolignol Biosynthesis Gene Families AT4G34050 77.869 1.84e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3359 K00588 - gmx:100795858 415.616