Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3358 ATGGCTGCCAATAACGGAGAGGACCAGCAAAACCAACTCAGCGGCCACAAAGAACTAGCTCACAAGAGTCTCCTTCAGAGTGATGCACTCTATCAGTATATACTTGAAACCAGTGTGTTTCCCAGAGAGCATGAGAGCTTGAAGGAGCTTCGCGAGATGACAGAAAAACACCCTTGGAACCTGATGGCTACTCCACCTGACGAGGGACAACTATTAAGGATGCTAATTAAACTCATCAACGCCAAGAACACCATAGAAATCGGTGTCTTCACTGGTTACTCTCTGCTCTCCACTGCCCTCGCTCTTCCTGAAGATGGAAAGATTTTGGCTTTGGACGTGAGCCGTGAATACTATGAATTGGGATTACCCATAATTGAGAAGGCTGGGGTGGCTCACAAGATTGATTTCAGAGAAGGACCTGCTCTTCCTGTTCTTGACGAATTGCTAGAGGATGAAAGTAATAAGGGAACATTTGATTTCGTTTTTGTGGATGCTGATAAGGATGAATTATCACAAAAGGGTGATTGA 528 0.4489 MAANNGEDQQNQLSGHKELAHKSLLQSDALYQYILETSVFPREHESLKELREMTEKHPWNLMATPPDEGQLLRMLIKLINAKNTIEIGVFTGYSLLSTALALPEDGKILALDVSREYYELGLPIIEKAGVAHKIDFREGPALPVLDELLEDESNKGTFDFVFVDADKDELSQKGD* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3358 175 CDD AdoMet_MTases 85 165 - -
Lja4g3358 175 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 1 169 - -
Lja4g3358 175 Pfam O-methyltransferase 37 169 IPR002935 GO:0008171
Lja4g3358 175 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 175 IPR002935 GO:0008171
Lja4g3358 175 PANTHER O-METHYLTRANSFERASE-RELATED 1 169 - -
Lja4g3358 175 Gene3D Vaccinia Virus protein VP39 12 173 IPR029063 -
Lja4g3358 175 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 170 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3358 Lja-Chr4 63420867 63422847 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3358 5 168 Monolignol Biosynthesis Gene Families AT4G34050 79.394 1.04e-93 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3358 K00588 - gmx:100795858 295.049