Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3357 ATGTCAACAAGCATCAAAGCTTCTTACACTGTCATCCCCGCCGAGCCTACTCCAAACACTGTCCTATGCTTGTCTCCAAGTGACCAAATGACTCGTTGGACTCACATTTCCGCCATCTACGTTTACAAAGAAGCCCCCAACCACAACGCCATGGACACCATGAGAGATTCTCTTAGCAAAATTCTCGTCCATTACTACCCCTTAGCCGGAAGACTTAGCTGGATCGAAGGTCACCGTCTCCAGCTCAACTGCAACACCAAGGGTGCCACATTGATCGAAGCCGAATCGACGAAAACACTCTCTTCATACGGAGACTTTGCGCCGAGTGACACCATAAGAAACGACCTCACTCCCACCATCGATTACACCCAACCCTTAGAGGACCTACCATTATTGCTAGTGCAAGTGACAAGGTTCAAAGGAACCAAGCAGGGCCTTGTCATAGGGATTTCAATTAACCACGTTTTATGTGATGGTCTTGCCTTTATTCGCTTCATCAACTCTTGGGCCAAGCTTTGTAAAGGGGACGCATTAGATCACATCGAGATGTTCATCTTTCTTGATCGGACGGTGATGAGCTCCTCCACGCGCCCGTGCTTCGACCACCCTGAGTTGAAGCTGCTCCCGCTCTTGCTAGGAAGCACCGACACCGCGACAGAACAGAAACACGAGAGAGCCGCTGCGGTGCTGAAACTGACAAATGCACAAGTGGCGAAACTGAAGGAAAAAACCAATGATGAAGGCATGAAACAACAAGAAGGGTCATCAGGAAAATCTTACAGCACGTACGAGGTTGTTTCCGCACACGTGTGGAAATGTTTGACCAAGGCGCGTGGACTTGATGATGTTCAACCTATGGTGGTTAGGATGATTGCAAATATTCGTAGCAGGCTGAACCCACCTCTTCCTATAAACTATTTCGGTAACGCGCTGGCCGTGACATTAACTCTAACATGTTTTGCGAGGGATGTTTTGTTAAACCCGCTGAGGTACAGTGCGAGGAAGATAAGAGAAGCAATAGAGTTTCTTAAGGAAGATTATGTGAGGTCGCAACTAGATTACATTCAGTGTCAGAGACATCTGAATTCTATCCGGGCTTCAAATTTTGAACCTGAGAAGCATAACAACGCACTGTTTTATGGGAACCCAAACCTTATGATTGTGAGTTGGATGAGCATGCCGGTGTACGAAGCAAATTTCGGGTGGGGGAAGCCTGTGCATTTCGGTTATGGACCTGTGTTTCCTCATGATATTGCGTATATTATTCGGAGCTCTGATGGGGATGGGTCACTTATCGTGCATGTGCATTTGCAGATAAGGCACATGGAGCTTTTCAAGAAGTTCTTCTACCAAGATATTTTGAGTTCATTTTCCTTGCTAGATGCCCTTTAA 1392 0.4677 MSTSIKASYTVIPAEPTPNTVLCLSPSDQMTRWTHISAIYVYKEAPNHNAMDTMRDSLSKILVHYYPLAGRLSWIEGHRLQLNCNTKGATLIEAESTKTLSSYGDFAPSDTIRNDLTPTIDYTQPLEDLPLLLVQVTRFKGTKQGLVIGISINHVLCDGLAFIRFINSWAKLCKGDALDHIEMFIFLDRTVMSSSTRPCFDHPELKLLPLLLGSTDTATEQKHERAAAVLKLTNAQVAKLKEKTNDEGMKQQEGSSGKSYSTYEVVSAHVWKCLTKARGLDDVQPMVVRMIANIRSRLNPPLPINYFGNALAVTLTLTCFARDVLLNPLRYSARKIREAIEFLKEDYVRSQLDYIQCQRHLNSIRASNFEPEKHNNALFYGNPNLMIVSWMSMPVYEANFGWGKPVHFGYGPVFPHDIAYIIRSSDGDGSLIVHVHLQIRHMELFKKFFYQDILSSFSLLDAL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3357 463 Gene3D - 214 452 IPR023213 -
Lja4g3357 463 Pfam Transferase family 4 450 - -
Lja4g3357 463 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 453 - -
Lja4g3357 463 SUPERFAMILY CoA-dependent acyltransferases 21 175 - -
Lja4g3357 463 Gene3D - 1 206 IPR023213 -
Lja4g3357 463 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 5 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3357 Lja-Chr4 63410457 63411848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3357 1 451 Monolignol Biosynthesis Gene Families AT5G48930 34.066 2.09e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3357 K13065 - gmx:100787038 574.704