Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3356 ATGTCATCAACAACCACCATCAAAGCTTCTTACACTGTCATCCCCGCCGAGCCTACTCCAAACACTAACCTATGGTTATCTCCGAGTGACCAAGTCACGCGTTGGACTCACATGTCTGCTATCTATGTTTACAAAGAATCCCCCAACCACGACGCCATGGACACCATGAGAGATTCTCTCAGCAACATTCTCGTCCATTACTACCCCCTCGCCGGAAGGCTTAGCTGGATCGAAGGTCACCGTCTTACACTCAATTGCAACGCCAAGGGTGCCACATTGCTCGAAGCCGAATCAACGAAAACACTCTCTTCATACGGAGACTTCGCGCCGAGTGACACCATAAAAAATGACCTAACTCCCACCGACCTCCCTCTATTGCTAGTGCAAGTGACAAGGTTCAAAGGAACCAAGCAGGGACTTGTCATAGGGATTTCTATTAACCATGTTTTATGTGATGGTCTTGCCGCTATTCGTTTCATCAACTCTTGGGCCAAGCTTTGTAAAGGGGACGCGTTAGATCACAGTGAGATGTTCCCCTTTCTTGACCGAACGATAATGAACTCCTCCACATGCCCGCGCTTTGACCACCCTGAGTTGAAGCCGCTCTCGCTCTTGCTAGGAAGCACGAACAATGCGGAAGAAAGGAAATACGAGAGAGCCGCTACGGTGCTGAAACTGACAAAGGTGCAAGTGGCCAAATTGAAGGAAATAACCAATAACGATGGCATGAAACAACAAGAAGGGTCGTCAGGAGTACCTTACAGCACGTTTGAGGTTGTTTCCGCGCATGTGTGGAAATGTCTGACCAAGGCGCGTGGGCTTGATAATGTTCAACCGATGGTGGTTAGGGTGATTGCAGATATTCGTAGCAAGCTGAACCCGCCTCTTCCTATGAACTATTTTGGGAACGCGCTGGCCGTGGCGTTGACTCCAACATGTATCGCAAAGGATGTTTTGTCGAACCCGCTGAGGTACGGTGCGAGGAAGATACGAGAAGCGGTGGATTTGCTTAAGGATGATTATTGA 1026 0.4903 MSSTTTIKASYTVIPAEPTPNTNLWLSPSDQVTRWTHMSAIYVYKESPNHDAMDTMRDSLSNILVHYYPLAGRLSWIEGHRLTLNCNAKGATLLEAESTKTLSSYGDFAPSDTIKNDLTPTDLPLLLVQVTRFKGTKQGLVIGISINHVLCDGLAAIRFINSWAKLCKGDALDHSEMFPFLDRTIMNSSTCPRFDHPELKPLSLLLGSTNNAEERKYERAATVLKLTKVQVAKLKEITNNDGMKQQEGSSGVPYSTFEVVSAHVWKCLTKARGLDNVQPMVVRVIADIRSKLNPPLPMNYFGNALAVALTPTCIAKDVLSNPLRYGARKIREAVDLLKDDY* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3356 341 Pfam Transferase family 6 336 - -
Lja4g3356 341 Gene3D - 207 341 IPR023213 -
Lja4g3356 341 Gene3D - 2 201 IPR023213 -
Lja4g3356 341 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 341 - -
Lja4g3356 341 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 7 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3356 Lja-Chr4 63393646 63394920 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3356 7 341 Monolignol Biosynthesis Gene Families AT5G48930 33.237 2.94e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3356 K13065 - gmx:100787038 420.239