Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3355 ATGGATACAGTCCGAGTCATCTCCAGCAGCACCGTCCAAGCACCGAGTCAGAACGGCGGCGACTCAGCACAGAAAATTGATTTAACACCATGGGATCTCAAATTCCTCTTACTTGAAACAGTCCAAAAAGGCCTTCTCTTCCACACAAAAAACCACCAAATCCACCACCTCCAACACTCCCTTTCCTCCACTCTCGCCTTCTTCCCACCCCTCGCCGGCCGCCTCGTCATCACGCGCCACCATGACAACACCACCGCCACCTCCCACATCACCTGCAACAACGCCGGCGCACTCTTCGTCCACGCCGCCGCAGAAAACACCTCCGTCGCCGACATCCTTCAACCCAACTACGTTCCTCCCATTGTCCACTCCTTCTTCGCACTCAACGGAGCTAGAAACCACGAAGGCACTTCGCAGCCGTTGCTGGCGGTGCAGGTGACGGAGCTACTCGACGGAATCTTCATCGGCTTCACAGTCAACCACTCTGTCGCCGACGGCAAGTCGTTTTGGCTTTTCGTGAATTCCTGGGCTGAAATCTCACGGGGTTCTCTTAAACCATCGAAATCCCCTGTTTTTCAACGTTGGTTTCCAAACGACATTGAAGTTCCAATTCGGTTTCCTTTCACAGATCAGAAGCAAGCTCATAAGTACTCTGAAACCCACCCTTCGGAGAGGGTCTTCCATTTCACGAAGGAGAAGATTGCGGAGCTCAAGGTTAAAGCTAACACGGAAGCTAACACGAACAGAGTATCTTCTCTGCTAGCGCTTTTGACTCACCTATGGCGCTCTGTGATTCGTTGCAAGCAGCTTGATCCTGAAGAAGAGGTGAGTTATCGGTTGCTGATCGGAGTTAGGCCGAGGATGGTTCCGCCGTTCCCGGAGGACTATTTCGGAAACGCGTTGGTGGCGGGTGGTGTTACCATGAAAGCAGGGGAGCTGGTGGTGGAAGGTGGGCTAGGGAAGGTAGCTATGGAGATGAACAAGGTGGTTTCGTTGGAGTCTGATGAGACGGTGAAGAAGGAGTATGAGAGTTGGGTGAAGAAACCGTGGCTGATTCCACCGGCCATGTTGATCGGTGGTCACTCATTGACCACCAGCAGTTCGCCGAGGTTTGATGTTTATGGGAATGATTTTGGGTGGGGGAAGCCGGTGGCTGTTCGGAGTGGCGGCGCCAATAAAGGATATGGGAAGATTACGGTGTTTGCTGGGGTGGAGGAAGGTAGCATTGACATTGAAGTGTGTCTTCCTATTGAGATTCTGGAGGCATTGGGAAATGACCCTGAGTTCACTCATACCATTTCCAGTTAA 1308 0.5229 MDTVRVISSSTVQAPSQNGGDSAQKIDLTPWDLKFLLLETVQKGLLFHTKNHQIHHLQHSLSSTLAFFPPLAGRLVITRHHDNTTATSHITCNNAGALFVHAAAENTSVADILQPNYVPPIVHSFFALNGARNHEGTSQPLLAVQVTELLDGIFIGFTVNHSVADGKSFWLFVNSWAEISRGSLKPSKSPVFQRWFPNDIEVPIRFPFTDQKQAHKYSETHPSERVFHFTKEKIAELKVKANTEANTNRVSSLLALLTHLWRSVIRCKQLDPEEEVSYRLLIGVRPRMVPPFPEDYFGNALVAGGVTMKAGELVVEGGLGKVAMEMNKVVSLESDETVKKEYESWVKKPWLIPPAMLIGGHSLTTSSSPRFDVYGNDFGWGKPVAVRSGGANKGYGKITVFAGVEEGSIDIEVCLPIEILEALGNDPEFTHTISS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3355 435 Gene3D - 208 425 IPR023213 -
Lja4g3355 435 Gene3D - 2 204 IPR023213 -
Lja4g3355 435 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 431 - -
Lja4g3355 435 MobiDBLite consensus disorder prediction 1 23 - -
Lja4g3355 435 Pfam Transferase family 6 429 - -
Lja4g3355 435 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3355 Lja-Chr4 63382392 63383924 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3355 57 418 Monolignol Biosynthesis Gene Families AT5G48930 27.368 1.48e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3355 - - lja:Lj0g3v0319259.1 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3355 4 63382392 63383924 Lja4g3355 4 63382392 63383924 ECH