Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3332 ATGGCTCAGCTCAGAGACAGAGTAAGAACTCGATCAGCATTATTGTCCATGGAACCTGCTTCTGCTGAAACTTCATCAAAGAGAAGCAAAATCGCCATTACCACCACCACTAGCCGAGAAGAACTACTCAGATTCTCACCATCCTCCTCCGTTCAGCTCGAAAGCACTACTAGTACCAGCGACGGCGGTGCTCCACCGCCACCGGAGCAATGCTTCTCCGGCGCCACGTCGGACGAATTGCCTTGTTGTTCCAGCAATGAAAAAACCATCACCAAATTCTCAGATCCAGAGGTAGAGAGCGCGCGAGCTGAAACGGCGTCGTGCGATGGCAGAGACGAAGAAGAAGAAGAAACAACAAGGAAGAGAGAGATGTCGACGAGTCATGGAACGAGTTCTCAAGAGGTGGACTCAGTGGAGGAGAAGGAGAAGCTGCAAAAGATGCCAACTGAGTCTGAGCTTGAAGAATTCTTCTCTGCTGCTGAGAAAGATATCCAGAAACGGTTTTCACACAAGTATAATTATGATATTGTGAAGGATGTGCCATTGGAAGGACGCTATGAGTGGGTTCAATTAAAGCCTTAA 582 0.4828 MAQLRDRVRTRSALLSMEPASAETSSKRSKIAITTTTSREELLRFSPSSSVQLESTTSTSDGGAPPPPEQCFSGATSDELPCCSSNEKTITKFSDPEVESARAETASCDGRDEEEEETTRKREMSTSHGTSSQEVDSVEEKEKLQKMPTESELEEFFSAAEKDIQKRFSHKYNYDIVKDVPLEGRYEWVQLKP* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3332 193 MobiDBLite consensus disorder prediction 1 152 - -
Lja4g3332 193 MobiDBLite consensus disorder prediction 77 91 - -
Lja4g3332 193 MobiDBLite consensus disorder prediction 92 124 - -
Lja4g3332 193 MobiDBLite consensus disorder prediction 17 64 - -
Lja4g3332 193 Pfam Cyclin-dependent kinase inhibitor 147 191 IPR003175 GO:0004861|GO:0005634|GO:0051726
Lja4g3332 193 PIRSF CKI_KRP_plant 1 193 IPR044275 GO:0004861|GO:0045736|GO:0051726
Lja4g3332 193 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 8 193 - -
Lja4g3332 193 MobiDBLite consensus disorder prediction 134 152 - -
Lja4g3332 193 Gene3D p27 138 193 IPR044898 -
Lja4g3332 193 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 8 193 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3332 Lja-Chr4 63028419 63030125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3332 148 193 Core Cell Cycle Gene Families AT1G49620 71.739 1.17e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3332 - - vra:106765801 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0346 2 3159926 3162094 Lja4g3332 4 63028419 63030125 ECH
Lja4g3332 4 63028419 63030125 Lja4g3332 4 63028419 63030125 ECH
Lja2g0346 2 3159926 3162094 Lja4g3332 4 63028419 63030125 PCT