Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3304 ATGGCTGTGATTGCAGATGCACTTGTGGGGGAGCTTGTTGGGCAACTGCTGGGTGTGGTTATTGAGATGAAAGACAAGAATCTGAAGTTCAAATCCACTCTGGAGGAATTGCAGGGCACCCTGGAATCAATAAGGCCAGATGTTGATAAGATAGTAGAACTATACAGGGTACGGGATCGAGCATCGGAAACGGAGAAGCTTGTTGAACTTATGAAGACTGGAAAAAAACTTGTTCAGGAGTGTGCTAATGGATTCAAGTGGTGGAACTGTTTTTATCAGAGGGCTAACTACCAAGAGAAACTTGCAGAATTGGACGCGTCGATTCTTAAGTACTTTCAGATGGATATGCAAGCTAAGATTGCCACCACCGTGTTGGTGATCGAGGATAAGGTTGACGAGCTTCGTGCGGATTTACACAATGTTGTTGCTATGACTATGAAAAACGAAAGGATTGCATTGAAGGTGTGCACGGCTCCTGCGCCACCTGAATTCACTATCGGCTTGGATGTTCCTTTGAAGGAGCTGAGGCTTAGGGTGCTCCGGGAAACCGTTACTGTCTCGGTGACCACGGTAACTGGTTCAGGAGGTTTAGGGAAGACTACATTAGCCAAGAAGTTTTGTTGGGATGAGCAGGTCAAAGGTAAATTCAAGGAGAATATCTTCTTCGTCACTTTTGCAAAAAATCCAAAGTTGAATACGATAGTGCAGAATCTGTTTCAACACAATGGTCACCAAGTGCCGGACTTTCAAAGTGAAGAAGATGCTATCAACCAACTGGGAAATTTGATGATGCAGATTGGGCAAAAAGGTCCAATACTGTTGGTACTGGACGATGTCTGGCTCGGATCGGAATCTCTTGTTGACAAATTTGTGTTCCAAATTCCAAACTACAACATTTTGGTGACATCAAGATCTGCCATTGCAAGATATGACTCTGGCTCTCCGTACGTCTTGGAACGACTAAGTCTAGAAGATGCCACCAGTCTATTTCTCCATTCAGCATCCTTGAGTCCAAACAGCACTGAAATTCCTGTTTCTCTTGTGAAAAAGATAGTCAAAGGTTGCAAGCGTTCTCCCATTGCACTTACAGTGACTGGCACCTCACTAAAGAACAAGAACCTGGCGGTTTGGCGCAGCAGGGCAAAGGCATTGTCCAAGGGTCAATCAATTCTGGAGTCTAACCACGATGTACTTACTTGTCTCCAAAAGAGCTTGGATGTTTTGGATCCTATTGCCATAGAGTGTTTTAAGGACCTAGGCTTGTTTCCTGAAGATCAAAGGATCCCTGCTGCTGCCCTTGTGGATATGTGGGCAGAGCTGCGTTGTGGAGATGATGAGACTGCAATGGAGAAAATTTATGAGCTGGTGAATCTGAACATGGCTGATATTGTTGTGACAAGGAAAGTTGCAAATGACATAGTAGACTATAATTACCACTATGTCGCCCAGCATGGTCTTCTTCGAGAGCTAGCCATTCGGCAGACACGCCAGGAACCAGAGTCCAAGAGGAATAGGCTAATTATTGAGATTAATGAAAATAAGCTTCCCGATTGGTGGAGCGTACAGAAGGCGTATCCCACTCCAGCCAAAATATTATCCATCTCAACTGATGAAAAATTCTCTTCAGAATGGTGTAACTTGCAAGCGACTGAAGTTGAGGCTCTAGTGTTGAACTTTCGAGGAAAGAAGTGCACATTGCCAATGTTCATGAAGAATATGAAGAAATTAAAAGTCTTGACAATTACAAATTATGACTTCTATCCTGCTGAGTTGGAGAATTTCGAGCTGCTTGATGATTTACCTAGTCTTAAACGGCTCAGATTAGAGAAGGTTTCTATTCCTTTCCTTAGCAAGATCGGAGTGAAACTGGAGAATCTGCAGAAATGTTCATTTTTTATGTGCAATGTGATTGGAGTATTTGACAATTGCACTACCCAAGTTTCAGATATGCTGCCAAAATTGGAGGAGATTGACTTTGACTATTGCACTATGGTGGATCTACCTGTTGTGCTCTCTAATAGTGATAAGTTAAAAAGGCTTAGGATCACAAACTGCCATAAGATTTCTGCACTTCCTGAAGTTGGAAAGAATTTGAAATCACTAAGGCTAAGTTCTTGCAGTGGTTTATTAGAGTTGCCAAAGTCAATCACAAACCTTGAGAAACTACAATTTCTTGACATCTCTGACTGCATAAGTCTCAGTAATTTACCTGAGGACATGGGTGAGTTGAAAAAGTTAGAAAAGCTCAATGTCAGAGGCTGCTCAAGATTAACCGAGTTGCCTACATCAATCATGGACCTTGAAAACTTAGAGGAAGTGGAATGTGATGAAGAGATAGCTGAATTATGGGAACCTGTCAAACAAATCCTTAGTGATCTACAGCTACATGTCGCCCCAACTGATTTCAACTTAGATTTTCTTTCTAAGTTGCGCTCATCATAG 2442 0.4247 MAVIADALVGELVGQLLGVVIEMKDKNLKFKSTLEELQGTLESIRPDVDKIVELYRVRDRASETEKLVELMKTGKKLVQECANGFKWWNCFYQRANYQEKLAELDASILKYFQMDMQAKIATTVLVIEDKVDELRADLHNVVAMTMKNERIALKVCTAPAPPEFTIGLDVPLKELRLRVLRETVTVSVTTVTGSGGLGKTTLAKKFCWDEQVKGKFKENIFFVTFAKNPKLNTIVQNLFQHNGHQVPDFQSEEDAINQLGNLMMQIGQKGPILLVLDDVWLGSESLVDKFVFQIPNYNILVTSRSAIARYDSGSPYVLERLSLEDATSLFLHSASLSPNSTEIPVSLVKKIVKGCKRSPIALTVTGTSLKNKNLAVWRSRAKALSKGQSILESNHDVLTCLQKSLDVLDPIAIECFKDLGLFPEDQRIPAAALVDMWAELRCGDDETAMEKIYELVNLNMADIVVTRKVANDIVDYNYHYVAQHGLLRELAIRQTRQEPESKRNRLIIEINENKLPDWWSVQKAYPTPAKILSISTDEKFSSEWCNLQATEVEALVLNFRGKKCTLPMFMKNMKKLKVLTITNYDFYPAELENFELLDDLPSLKRLRLEKVSIPFLSKIGVKLENLQKCSFFMCNVIGVFDNCTTQVSDMLPKLEEIDFDYCTMVDLPVVLSNSDKLKRLRITNCHKISALPEVGKNLKSLRLSSCSGLLELPKSITNLEKLQFLDISDCISLSNLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLENLEEVECDEEIAELWEPVKQILSDLQLHVAPTDFNLDFLSKLRSS* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3304 813 PRINTS Disease resistance protein signature 717 733 - -
Lja4g3304 813 PRINTS Disease resistance protein signature 266 280 - -
Lja4g3304 813 PRINTS Disease resistance protein signature 355 369 - -
Lja4g3304 813 PRINTS Disease resistance protein signature 188 203 - -
Lja4g3304 813 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 808 IPR039203 GO:0050832
Lja4g3304 813 Gene3D - 405 490 IPR036388 -
Lja4g3304 813 Gene3D - 141 312 IPR027417 -
Lja4g3304 813 Gene3D Ribonuclease Inhibitor 507 792 IPR032675 -
Lja4g3304 813 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Lja4g3304 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 419 IPR027417 -
Lja4g3304 813 SUPERFAMILY L domain-like 508 774 - -
Lja4g3304 813 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1 808 - -
Lja4g3304 813 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 137 IPR008808 -
Lja4g3304 813 Gene3D - 321 404 IPR042197 -
Lja4g3304 813 Pfam NB-ARC domain 186 390 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3304 Lja-Chr4 62318459 62323844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3304 653 763 WRKY Transcription Factor Family AT4G12020 36.937 1.35e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3304 - - mtr:MTR_8g479450 879.396