Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3303 ATGACTATGATTGCAGATGCCCTTGTGGGGGAACTGGTTAAGGAACTTCTGGGTGCAGTTAAAGATGTCATGATCAAGGCTGTGAAGTTCAAGTCCTCTCTGGAGAAGTTGAAGAGCACCCTGGAATCATTAGGACCAGATGTGGATAAGATAGTAGAACAATACAGGGCACGGGATCGTGCATCGGAAACGAAGAAGCTGGTTGAACTTATGAAGAGTGGAAAGAAACTTGTTCTGGAGTGCTCTAATAAATTTTATTGGTTGAAGCGTTTATATACCAAGGCCCAATACCAAGAGAAACTTGAAGAGTTGGATGCAAAAATTTTTAGGTACTTTCAGCTTGATATGCAAGCTAAGATTGTCAGGACTGTGTTGGACATTGAGGTGAAGGTTGATGGAATCAGTGAGGATTTGAGAAAGGCTGTTGTTACGAAAAAGGAAAGTGTTGGATTGAAGGTGTGTGCAGCTCCTACACCCCCGGAATTCACTGTTGGCTTTGAAGGTCCTCTGAAAGATTTGAAGCACAAGTTGCTTCGGGAAGAGGTTAATGTCTCGGTGCTCCCGGTTACTGGTTCACGAGGTTTGGGAAAGACTACATTAGCCAAAATGTTTTGCTGGGATGAACAAGTCAAAGGTAAATTCAAGGAGAATATCTTCTTCGTCACCTTTGCAAAATCGCCCAACTTGCATACCATAGTGCAGAATCTGTTTCAACACAATGGTCACCCAATGCCTGAGTTCCGAAGTGATGAAGACGCTAAAAACCAATTGGAAAATTTGTTGAAACTGATTGGGAAAAGTGGTCCAATACTGTTGGTACTGGACGATGTTTACCCTGGATCGGAATCTCTTGTTGACAACTTTGTGTTCCAGATCCCAAACTACAAAATTTTGGTGACATCAGGATCCGCAATCACAAGGTTTGGCCCTCCATACGTCTTGAAACCACTTGGTGATGAAGATGCTCTAAAGCTATTTTGTCTCTCAGCATCCCTAAATCAAAAGAGCACTAATATCCCTGATGATGTTGTGAAAATGATAGTGAAAGGTTGTAGAGGTTCTCCCTTGGCACTTTCAGTGACTGGCAAATCGCTAAGGGACCAGAACTTGGTGTTTTGGCGCAAGAGAGCGAAGCACTTGTCCAAGGGAGGTTCAATATTGGGTTATGAAAAATATGTGCTTACTTGCCTCCAAGAGAGCTTAGACAATTTGGATCATAAGGCCATAGAGTGTTTTAAAAATATAGGCTTATTTCCTGAAGATCAGAGGATCCCTGCTGCTGCCCTCATGGATATTTGGGCAGAACTGCATAATGAAGATGATGAGACTGCAATGGAGATCATTTATGAACTGGTCAACCTGAACATGGTTGATATTATTGTCACAAGGAAAGTTGCAAGTGACATAGTTGACTATAATTATCACTATGTCACTCAGCATGGTCTTCTTCGGGATTTAGCCATCCTTCAGACTAGTGAGGAGACAGAGGACAAGAGGGATAGATTAATTATTGAAATAAATAGAAATAATCTTCCTGCATGGTGGAGTTTAGAGAACGAGTATCCCATTGCAGCCCGCATATTATCCATATCAACTGATGAAGCATTCTCTTCAGAGTTGTGTAACTTGCAGCCAACTAAAGTTGAGGCTTTAGTATTGAACCTTCGAGGAAAGAAGTACACACTGCCAATGTTCATGGAGAAAATGAATAAACTAAAAGTCTTGACAATTACAAATTATGATTTATATCCTGCCGAGTTAGAGAATTTTGAGATGCTTGATCATCTATCTAATCTTAAACGGCTCAGATTGGAGAAGGTGAGAATTCCTTTCCTCAGCAAGACCGGAGTGCAACTGAAGAATCTGCAGAAGTGTTCTTTTTTCATGTGCAATGTGAATGAAGCATCCGAAAATTGCACGGCCCAAGTTTCAAATATGTTGCCAAATTTGGTGGAGATGGACTTTGACTATTGTACTATGGTGCAACTTCCAGTTGTGCTCTCTGATATTGTTTTGTTAAAGAATCTTAGGATCACAAACTGCCATAAACTTTCTGCACTTCCTGAAGGAATTGAAAAGTTGGTCAATTTGGAATCACTAAGGCTTAGTTCCTGCACTGGTTTATTAGAGTTGCCAGACTCAATCACAAGCCTTCAGAAACTAGAATTTCTTGACATCTCAGACTGCATAAGCCTCAGTAATTTGCCTGAGGGCATGGGCAAGTTGAGTAATTTAGAGAAGCTCAATGTCAAAGGCTGCTCAAGATTAATGGAGTTGCCTGCCTCAATCATGGAACTTGAGGATTTAAAGGATGTGATATGTGATGAAGAGGTGGTTGAATTATGGGAACAATTCAAAATCATTCTCGGTAATCTAAGGCTACAGGTCGTCCAAGTTGACTTCACTTTGGATTTTCTTCATAATTCACGCTGA 2433 0.4098 MTMIADALVGELVKELLGAVKDVMIKAVKFKSSLEKLKSTLESLGPDVDKIVEQYRARDRASETKKLVELMKSGKKLVLECSNKFYWLKRLYTKAQYQEKLEELDAKIFRYFQLDMQAKIVRTVLDIEVKVDGISEDLRKAVVTKKESVGLKVCAAPTPPEFTVGFEGPLKDLKHKLLREEVNVSVLPVTGSRGLGKTTLAKMFCWDEQVKGKFKENIFFVTFAKSPNLHTIVQNLFQHNGHPMPEFRSDEDAKNQLENLLKLIGKSGPILLVLDDVYPGSESLVDNFVFQIPNYKILVTSGSAITRFGPPYVLKPLGDEDALKLFCLSASLNQKSTNIPDDVVKMIVKGCRGSPLALSVTGKSLRDQNLVFWRKRAKHLSKGGSILGYEKYVLTCLQESLDNLDHKAIECFKNIGLFPEDQRIPAAALMDIWAELHNEDDETAMEIIYELVNLNMVDIIVTRKVASDIVDYNYHYVTQHGLLRDLAILQTSEETEDKRDRLIIEINRNNLPAWWSLENEYPIAARILSISTDEAFSSELCNLQPTKVEALVLNLRGKKYTLPMFMEKMNKLKVLTITNYDLYPAELENFEMLDHLSNLKRLRLEKVRIPFLSKTGVQLKNLQKCSFFMCNVNEASENCTAQVSNMLPNLVEMDFDYCTMVQLPVVLSDIVLLKNLRITNCHKLSALPEGIEKLVNLESLRLSSCTGLLELPDSITSLQKLEFLDISDCISLSNLPEGMGKLSNLEKLNVKGCSRLMELPASIMELEDLKDVICDEEVVELWEQFKIILGNLRLQVVQVDFTLDFLHNSR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3303 810 SUPERFAMILY L domain-like 505 769 - -
Lja4g3303 810 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 808 IPR039203 GO:0050832
Lja4g3303 810 Pfam NB-ARC domain 169 382 IPR002182 GO:0043531
Lja4g3303 810 Gene3D - 401 488 IPR036388 -
Lja4g3303 810 Gene3D - 150 307 IPR027417 -
Lja4g3303 810 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 2 808 - -
Lja4g3303 810 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 138 IPR008808 -
Lja4g3303 810 PRINTS Disease resistance protein signature 186 201 - -
Lja4g3303 810 PRINTS Disease resistance protein signature 264 278 - -
Lja4g3303 810 PRINTS Disease resistance protein signature 716 732 - -
Lja4g3303 810 PRINTS Disease resistance protein signature 351 365 - -
Lja4g3303 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 413 IPR027417 -
Lja4g3303 810 Gene3D Ribonuclease Inhibitor 522 788 IPR032675 -
Lja4g3303 810 Gene3D - 317 400 IPR042197 -
Lja4g3303 810 ProSiteProfiles RPW8 domain profile. 2 150 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3303 Lja-Chr4 62305844 62311107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3303 164 765 WRKY Transcription Factor Family AT5G45050 21.704 1.16e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3303 - - mtr:MTR_8g479450 921.768