Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3265 ATGGAAAGACTATCGTCAAACACCGGTAGGGAAGGAGCGCTGTCATTTTCTGAACCCACTTGGCTGAAGGAGGAAGAGTCTATGGCATTATGGGTCAAGTGGAGCGGGACGTGGCAGGCCGGCATAAAATGCGCGAGGGCGGACTGTCCATTATCAACATTGAAAGCAAAACCGACTCATGAAATGGAGAAATATTTCGTCATCTTTTTCCCTGGCACAAAGTATTACTCTTGGGTTGATATGCTGCTTGTTCGACCGATCAATGAGTTTCCGCAGCCTATCGCGTATAAAACTCATCAGGAAGGATTGAAAATGGTAGAAGACTTGACTGTTGCGCGGCGGTTCATAATGAAAAAGCTAGCTGTCAGCATAATGGACATTGTTGATCAACTTCATTCGAATGCTTTGATAGAAACTGCTTGTGGTCTGATGCTCTGGAAGGAACTTGCTAAGGAGGCTTCTCGTTGTAACGCTTATTCGGATTTGGGGAGAATGCTTCTGAAGCTACAAAATAGCATAGCGCCGCGGTACATAAGTGCTGCCTGGGTTAATTCTTCATTTCACTCTTGGGTGGAACGATGCAAGAATACAAACAGTGCTGAATCAGTAGAGCTGCTGAAGGAGGAATTGTCTGATTCTATTCTGTGGAGTTATGTGAACAGTCTCTGCGGTGTGCCTGTGCAACCAAAACTTGCTTCTGCTTGCTGCGATATCAATATTTTGTCGATTATTTTCTCTGCTTGCTGCAAAGTTAGCCTTCAAGTCTCACTAGAAGAGAAATATGGGATTTTGCCCGAAAGTCTCTGCCTGAAGGTGGAAAAACTTTGTAGCGAGTATGAAGTTCTAGTGAATTGGCTCCAGGACGGGTTCATTTGTCCGAAGGGCTGTAAGAGTCTGCAATTGAGATGCAACTGCTCATTTTCTACCTGCTGTCCTGAAACATGCAATCATGTGTACCTTTTCGATACTGACTTTGGTGATGCTAAAGACGTATTTGGAAAACCTATGCGTCAAAGGTTCCCCTATGATGAAAATGGTCGCATAATACTAGAGGAAGGTTACCTTGTCTACGAGTGTAACCATATGTGCAGATGCAATAAAACCTGTCCAAACAAAATACTGCAGAATGGGATTCGGGTTAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGGAGTAAGGGCTGGTGAGGCTATTTTGCGCGGCACATTTATCTGCGAGCTCATAGGAGAAGTTTTAGATGAGAGGGAGGCGCGTGACAGACGCAAAAGGTTTACATTTCTTCATGATGTAGTTTGA 1302 0.4409 MERLSSNTGREGALSFSEPTWLKEEESMALWVKWSGTWQAGIKCARADCPLSTLKAKPTHEMEKYFVIFFPGTKYYSWVDMLLVRPINEFPQPIAYKTHQEGLKMVEDLTVARRFIMKKLAVSIMDIVDQLHSNALIETACGLMLWKELAKEASRCNAYSDLGRMLLKLQNSIAPRYISAAWVNSSFHSWVERCKNTNSAESVELLKEELSDSILWSYVNSLCGVPVQPKLASACCDINILSIIFSACCKVSLQVSLEEKYGILPESLCLKVEKLCSEYEVLVNWLQDGFICPKGCKSLQLRCNCSFSTCCPETCNHVYLFDTDFGDAKDVFGKPMRQRFPYDENGRIILEEGYLVYECNHMCRCNKTCPNKILQNGIRVKLEVFKTEKKGWGVRAGEAILRGTFICELIGEVLDEREARDRRKRFTFLHDVV* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3265 433 Gene3D SET domain 276 432 IPR046341 -
Lja4g3265 433 ProSiteProfiles SET domain profile. 380 433 IPR001214 GO:0005515
Lja4g3265 433 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 6 233 - -
Lja4g3265 433 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 6 233 - -
Lja4g3265 433 SUPERFAMILY SET domain 285 427 IPR046341 -
Lja4g3265 433 Pfam Pre-SET motif 299 372 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lja4g3265 433 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 238 299 - -
Lja4g3265 433 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 297 426 - -
Lja4g3265 433 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 238 299 - -
Lja4g3265 433 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 297 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3265 Lja-Chr4 61419129 61422104 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3265 297 426 C2H2 Transcription Factor Family AT2G23740 66.154 4.50e-54 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3265 - - lja:Lj0g3v0309989.1 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3265 4 61419129 61422104 Lja4g3265 4 61419129 61422104 ECH