Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3254 ATGGCTCTTTCTCGTGCCCTCATCCTAGTTGCTCTAACTGCAACCATCTTCTCAACCGTAGCTGTGGCAAAAGATTTCGTGGTTGGGGATGACAATGGCTGGACAACTTGGTTTGATTATAAAGCTTGGGCAGCAAACAAGGTCTTTCGTGTTGGGGACACACTTACATTCAAGTATCCTGCTTGGAAGGACAATGTGATCAGGGTGAATGGAACTGACTTTGTGAAATGCTCGGTTCCTTCAACAGCACAAGTGTGGAGCAGTGGACATGATACGATCGTATTGACAAGCAGTGGCAGAAGATGGTACATTTCTGGTGTTGGTGACCACTGCAAATCTGGCCAAAAGCTTGTCATAATTGTGCTTCCACCAGAAGCAGCGTGGTCTCCTTCACCTTCACCTGTACTTGGTGAAGTAGCACTAACACCTACACCCGCACCAGCAGCTGTACTTGCTGAAGTAGCACTAACGCCTGCACCCGCACCAGCACCATGGACTGCTCCCGTTACTGTATCTGCTGAAGTAGTACTAACACCTGCACCCGCACCAGCACCATGGACTGCTACTGTTTCCCACTTCGGTCGATGGAAGCCGAAGAAGCTATTCAAAATATTTCAGTAA 621 0.4847 MALSRALILVALTATIFSTVAVAKDFVVGDDNGWTTWFDYKAWAANKVFRVGDTLTFKYPAWKDNVIRVNGTDFVKCSVPSTAQVWSSGHDTIVLTSSGRRWYISGVGDHCKSGQKLVIIVLPPEAAWSPSPSPVLGEVALTPTPAPAAVLAEVALTPAPAPAPWTAPVTVSAEVVLTPAPAPAPWTATVSHFGRWKPKKLFKIFQ* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3254 206 Gene3D - 22 126 IPR008972 -
Lja4g3254 206 CDD Phytocyanin 24 121 - -
Lja4g3254 206 PANTHER BLUE COPPER PROTEIN 4 139 IPR039391 GO:0009055
Lja4g3254 206 PANTHER BLUE COPPER PROTEIN-LIKE 4 139 - -
Lja4g3254 206 SUPERFAMILY Cupredoxins 23 122 IPR008972 -
Lja4g3254 206 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Lja4g3254 206 ProSiteProfiles Phytocyanin domain profile. 24 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3254 Lja-Chr4 61282287 61282993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3254 1 168 Phytocyanin Superfamily AT4G28365 35.028 6.68e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3254 - - mtr:MTR_7g086230 193.356