Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3227 ATGTCTGACTCATACCTCACTTTCTGTTTTCTTTCTTCCATTCTTGCTCTCACTGTAATCATCATTTTCATGAAAAGAAAGAAGGCAAGGCTTAACCTTCCCCCTGGAAAAATGGGATGGCCCTTTCTTGGGGAAACCATTGGGTACTTGAAGCCATACTCTGCTACCACAGTAGGAGATTTTATGGAAAAGCACATAGCAAGGTATGGTACAATTTACAAGTCAAAATTGTTTGGTGAGCCTGCAATAGTTTCTGCAGATGCAGAGTTGAACAGGTTCATATTACAGAACGAAGGGAAGCTGTTTGAGTGCAGCTATCCAAGAAGCATTGGAGGAATACTTGGAAAATGGTCCATGTTGGTCTTAGTTGGGGACATGCATAGGGACATGAGAAACATTTCACTGAACTTTCTGAGCCTTGCTAGGCTCAAAACACATCTATTGAAAGAAGTGGAGAAGCACTCTCTTCTAGTTCTAGGCTCTTGGAAAGAAAATTGTACATTCTCAGCTCAAGATGAAGCAAAGAAGTTCACATTCAATTTGATGGCGAAACATATCATGAGCTTGGATCCTGGGAATCTAGAGACAGAACAGCTGAAGAAAGAGTATGTCTCTTTCATGAATGGTGTGGTGTCTGCACCTTTGAATTTTCCCGGAACTGCATACAGAAAAGCATTAAAGTCTAGGTCCACCATACTGAAGTTCATAGAGGGAAAAATGGAAGAAAGGATCAAAAGAAACCAAAATTTGGAGGAAGATCTTCTAAACTGGGTTGTGATGCATTCAAATCTTTCAACTGAGCAAATTCTTGACCTGGTTCTGAGCTTGCTCTTTGCAGGCCATGAAACTTCATCTGTGGCTATAGCTTTAGCTATTTACTTTTTGCCAGGTTGTCCTAAAGCTATACAACAATTAAGGGAAGAACATAGAGAAATAGCCAGGTCCAAGAAGCAAGCAGGGGAGGTTGAATTAACTTGGGATGATTACAAAAGAATGGAGTTTACTCAATGTGTTGTGAATGAAACACTGAGGTTGGGAAATGTTGTGAGGTTCCTTCACAGGAAGGCTCTGAAAGATGTTCGGTACAAAGGTTATGACATTCCACGTGGGTGGAAAGTCCTCCCTGTGATTTCAGCTATGCATCTGGATCCTGCACTTTTTTACCAACCTCAACACTTCAATCCATGGAGATGGAAGGAAAATATAAAAATTGGTTGTTGCCCAAGCACAAGCAATAACTTCATGCCGTTCGGGGGAGGACCAAGGTTGTGTGCAGGGTCAGAGTTAGCAAAACTTGAAATGGCTATTTTTATCCACCATCTCATCTTAAACTACAACTGGGAGCTGGTCAATGCCGATCCACCTGTTGCATACCCTTTTGTTGATTTTCCCCAAGGTCTATCAATCAGAGTTCAAAGCCACTCTTTGATATGA 1434 0.4142 MSDSYLTFCFLSSILALTVIIIFMKRKKARLNLPPGKMGWPFLGETIGYLKPYSATTVGDFMEKHIARYGTIYKSKLFGEPAIVSADAELNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRNISLNFLSLARLKTHLLKEVEKHSLLVLGSWKENCTFSAQDEAKKFTFNLMAKHIMSLDPGNLETEQLKKEYVSFMNGVVSAPLNFPGTAYRKALKSRSTILKFIEGKMEERIKRNQNLEEDLLNWVVMHSNLSTEQILDLVLSLLFAGHETSSVAIALAIYFLPGCPKAIQQLREEHREIARSKKQAGEVELTWDDYKRMEFTQCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPRGWKVLPVISAMHLDPALFYQPQHFNPWRWKENIKIGCCPSTSNNFMPFGGGPRLCAGSELAKLEMAIFIHHLILNYNWELVNADPPVAYPFVDFPQGLSIRVQSHSLI* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3227 477 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 PANTHER CYTOCHROME P450 26 16 451 - -
Lja4g3227 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Lja4g3227 477 PANTHER CYTOCHROME P450 90B1 16 451 - -
Lja4g3227 477 Coils Coil 233 253 - -
Lja4g3227 477 SUPERFAMILY Cytochrome P450 30 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 Pfam Cytochrome P450 34 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3227 477 Gene3D Cytochrome P450 22 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3227 Lja-Chr4 60914801 60922660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3227 25 400 Cytochrome P450 AT3G50660 74.378 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3227 K09587 - gmx:100789515 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3227 4 60914801 60922660 Lja4g3227 4 60914801 60922660 ECH
Lja2g0450 2 4118891 4123549 Lja4g3227 4 60914801 60922660 PCT