Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3202 ATGTTGAATATTCTCTCCAGAGAAGATCTAGTATTCGTAGTGCAAAATTATTATGAGGTAATCTTGGTCGCATTAATCTCAGTGTGGTTTACATATTTGGCTTCAAAAGCTTGGAAAGGAGCCAAAAATGAGAGAAAAGATATCCCTGGACGACTAGGATTACCTTTCATCGGGGAAACTTTTTCTTTGCTTTCAGCCACTAATAGCACAAGAGGATGCTATGATTTTGTCAGACTTAGACGATTGTGGCATGGGAGATGGTTCAAGACAAGGGTATTCGGCAAGATCCATGTATTTGTTCCTAACCCTGAAGGTGCTAGGACAATTTTTGCTAATGATTTTGTGGTATTCAACAAGGGTTATGTGAAATCAATGGCAGATGCTGTAGGAGAGAAAAGCTTATTATGTGTGCCCGTTGAGAGCCACAAAAGAATAAGGCGACTTCTATCAGAACCATTCTCCATGACCTCCCTATCTTCATTTATCACAAAATTTGACAAAATGTTGTGTGGAAGGCTGCAAAAGCTACAAGAGAGCGGGAAAAGTTTCAAGGTGCTGGACTTCTGCATGAAGATGACATTTGATGGAATGTGTGAGATGCTGATGAGCATCACGGAGGATTCATTACTACAAAAGATCGAGAAAGACTGCACAGCCACTTCTGATGCTATGTTATCTTTTCCTGTCATGATTCCTGGCACCAGATACTATAAAGGCATCAAGGCTCGTAGAAGGCTCATGCAAACCTTCAGAGAAATCATTGCTAGACGCAGGAGGGGAGAAGAGTCTTCAGAGGACTTCTTGCAGTCCATGTTGCAGAGAGACTCATTGCCAGCCAGTGAAAAGCTTGATGACTCTGAGATTATGGATAATCTGTTAACATTGATAGTTGCTGGACAGACTACCACAGCAGCAGCAATGATGTGGAGTGTCAAGTTTCTACATGACAACAAAGAAGTGCAGGACATACTCAGGGAAGAACAATTGTCTTTAACCAAAATGAAGCCAGAAGGAGCTTCACTTAAGCAAGATGACCTCAACAACATGCGTTATGGTTTGAAGGTAGTTAAGGAGACACTGAGAATGTCCAATGTCCTGTTATGGTTTCCTCGTGTAGCACTTCAAGACTGCACAATTGAAGGCCATGAAATAAAGAAAGGCTGGCACGTTAACGTCGATGCAACTTGTGTACATTACGACTCAGACTTGTACAAGGATCCGTTGAAATTCAATCCGCAAAGATTTGATGAAATGCAAAAGCCCTACAGTTTCATACCTTTTGGATCAGGGCCAAGGACATGCCTTGGGATGAATATGGCGAAAGTGACAATGTTGATCTTCTTACACAGACTCACTAGTAGTTACACGTGGACCCTTGATGATTTAGATACTAGTTTAGAGAAGAAGGCACACATACCTAGACTGAGGAGTGGCTGTCCAATAACGTTGAAGTCCTTAAGCAAAAGCTAG 1470 0.4177 MLNILSREDLVFVVQNYYEVILVALISVWFTYLASKAWKGAKNERKDIPGRLGLPFIGETFSLLSATNSTRGCYDFVRLRRLWHGRWFKTRVFGKIHVFVPNPEGARTIFANDFVVFNKGYVKSMADAVGEKSLLCVPVESHKRIRRLLSEPFSMTSLSSFITKFDKMLCGRLQKLQESGKSFKVLDFCMKMTFDGMCEMLMSITEDSLLQKIEKDCTATSDAMLSFPVMIPGTRYYKGIKARRRLMQTFREIIARRRRGEESSEDFLQSMLQRDSLPASEKLDDSEIMDNLLTLIVAGQTTTAAAMMWSVKFLHDNKEVQDILREEQLSLTKMKPEGASLKQDDLNNMRYGLKVVKETLRMSNVLLWFPRVALQDCTIEGHEIKKGWHVNVDATCVHYDSDLYKDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGMNMAKVTMLIFLHRLTSSYTWTLDDLDTSLEKKAHIPRLRSGCPITLKSLSKS* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3202 489 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3202 489 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3202 489 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3202 489 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3202 489 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3202 489 PANTHER CYTOCHROME P450 FAMILY PROTEIN 25 486 - -
Lja4g3202 489 PANTHER CYTOCHROME P450 26 25 486 - -
Lja4g3202 489 Gene3D Cytochrome P450 38 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3202 489 Pfam Cytochrome P450 53 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3202 489 SUPERFAMILY Cytochrome P450 46 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3202 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Lja4g3202 489 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3202 489 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3202 489 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3202 489 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3202 Lja-Chr4 60568847 60580240 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3202 49 458 Cytochrome P450 AT1G19630 44.337 5.86e-124 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3202 - - gmx:100789430 855.514