Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3198 ATGTTGAATCTCTCCAGAGAAGAGCTAGTGATCGTGGTCGCATTACTCTGTGTAGGAATAACATACCTGGCTTCAAAAGCTTGTAAAAGAGCTTCTTCAAACGAGAGAGAAGATATCCCTGGACGTCTGGGGTTACCTTTCATCGGGGAAACTTTTTCTTTTCTCTCTGCCTATAATAGCACGAGAGGAAGCTACGATTTTGTTACACCTAGGCGATTAAGGTTTGGGAGGTGGTTCAAAACAAGGCTATTCGGCAAGATCCATATCTTTGTTCCTAATTCTGAAGGTGCAAGGATAATACTTGCTAATGATTTTGTTCTATTCAACAAGGGATATGTAAAATCATTGGCAGAAGCTGCAGGAAAGAATAGCTTATTTTGTGTACCCGTTGAGAGCCACAAAAGGATGAGGCGCCTTCTATCAGAGCCATTCTCAATGACTTCCCCATCTGCATTTATCACAAAATTTGACAAAAAAATGTGTGCAAGGCTGCAAAAACTTGAAGAGGGTGGCCAAAGTTTCAAGGTGTTGGACTTCTGTATGAAGATGTCATTTGATGGAATTTGTGAGATGCTGATGAGCATCACGGAGGATTCATTACTAGAAAAGATCTGGAAAGACAGCATTGCCGCTGGTGAAGCCATGATATCTATTCCTGCCATGATTCCGGGCTCCAGATACTATAAGGGCATGAAGGCTCGTAGAAGGCTTGTGGAAACCTTCACAGAGATCATTGCAAGACGGAGAAGGGGAGAAGAGTCTGCAGAGGACTTCTTGCAGTCCATGTTGCAGAGAGATTTATTCCCAGCCAGTGAAAAGCTTGATGATTCTGAGATTATTGATAATATGTTAACATTCATATTTTCCGGACAGAGCACCACAGCAACAGCAATGATGTGGAGTGTAAAGTTCTTACATGAAAACAAAGAAGTACAAGATATACTCAGGGAAGAACAATTGTCTTTAAGCAAAATGAAGCCAGAAGGAGCTCCACTTACAAAAGAAGACATCAACAACATGCCCTATGGTTGGAAGGTACTTAAGGAAACACTGAGAATGTCCAATATCGTGTTATGGTATCCTCGTGTAGCACTTCAAGACTGCACCATTGAAGGGCGTGAAATAAAGAAAGGTTGGCACGTTAACATCGATGCAACTTGTGTACATTTCGACCCTGACTTGTACAAGGATCCCTTGAAATTCAATCCGCAAAGATTTGATGAAACTCAAAAGCCCTACAGTTTCATACCTTTTGGAGCAGGGCCGAGAACATGCCTTGGGATGTATATGGCAAAACTGAAAATGTTGATCTTTATACATAGACTCGTGGGGGGTTACACGTGGACACTTGATGATTTAGATAATAGCTTACAAGCGAAGGAACTCGTTCCTAAACTAAGGAGTGGTTGTCCAATAACGTTGAAGTCCTTAAGCAAAAGCAGGTCGGAGGAGCCAATATTTTCTATGTAA 1470 0.417 MLNLSREELVIVVALLCVGITYLASKACKRASSNEREDIPGRLGLPFIGETFSFLSAYNSTRGSYDFVTPRRLRFGRWFKTRLFGKIHIFVPNSEGARIILANDFVLFNKGYVKSLAEAAGKNSLFCVPVESHKRMRRLLSEPFSMTSPSAFITKFDKKMCARLQKLEEGGQSFKVLDFCMKMSFDGICEMLMSITEDSLLEKIWKDSIAAGEAMISIPAMIPGSRYYKGMKARRRLVETFTEIIARRRRGEESAEDFLQSMLQRDLFPASEKLDDSEIIDNMLTFIFSGQSTTATAMMWSVKFLHENKEVQDILREEQLSLSKMKPEGAPLTKEDINNMPYGWKVLKETLRMSNIVLWYPRVALQDCTIEGREIKKGWHVNIDATCVHFDPDLYKDPLKFNPQRFDETQKPYSFIPFGAGPRTCLGMYMAKLKMLIFIHRLVGGYTWTLDDLDNSLQAKELVPKLRSGCPITLKSLSKSRSEEPIFSM* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3198 489 Pfam Cytochrome P450 43 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 Gene3D Cytochrome P450 28 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 SUPERFAMILY Cytochrome P450 38 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3198 489 PANTHER CYTOCHROME P450 26 13 477 - -
Lja4g3198 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Lja4g3198 489 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3198 Lja-Chr4 60461265 60473313 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3198 40 449 Cytochrome P450 AT1G19630 43.133 1.05e-119 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3198 - - gmx:100789430 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3198 4 60461265 60473313 Lja4g3198 4 60461265 60473313 ECH