Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3196 ATGGGAAAGTCCATGAAGAAATCCAAAATCGCCGGCAACCTCGCCGCCGTGATCACAGAGGCTCCACCACCGCCTTCCTCGCCGCAACAGTCGGATCCCTCCGCCTACCTTCAGCTCCGGAGCCGCTGCCTCCTCCGCAGGGTTCCGCCCGCAGCCGCCAATTCCAGGCTCCGAGAGAGTTCGCCCAAAACGCCGTCGTCTCGGTTCTGTGTGCAAGAGGAGAACGCTGATGTCGGTGCGGAAGATTCTTTTGGAGAAAATTTCTTCGAGGTTGAAGACAGAGATAGAAGCACAAGGGAGAGCACACCTTGTAGTTTAATAAGGGATTCAAGTGCCATTGACACCCCAGGTTCAACCACAAGGCAAAGGAGGCACCACATAGTTCATCCACACATTCAAAGAAATATTCCAACGGCTTACGAAATGGAGGAGTTCTTCGCTTGTGCAGAGAAGCAGCAACAAACAAAATTTATGGACAAGTACAATTTTGACGTTGTGTATGAAGTACCTCTGCCAGGACGGTACGAATGGGTCCCAGTACTTCACTAG 549 0.5191 MGKSMKKSKIAGNLAAVITEAPPPPSSPQQSDPSAYLQLRSRCLLRRVPPAAANSRLRESSPKTPSSRFCVQEENADVGAEDSFGENFFEVEDRDRSTRESTPCSLIRDSSAIDTPGSTTRQRRHHIVHPHIQRNIPTAYEMEEFFACAEKQQQTKFMDKYNFDVVYEVPLPGRYEWVPVLH* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3196 182 PIRSF CKI_KRP_plant 1 182 IPR044275 GO:0004861|GO:0045736|GO:0051726
Lja4g3196 182 Gene3D p27 131 182 IPR044898 -
Lja4g3196 182 MobiDBLite consensus disorder prediction 92 124 - -
Lja4g3196 182 MobiDBLite consensus disorder prediction 1 69 - -
Lja4g3196 182 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 23 181 - -
Lja4g3196 182 MobiDBLite consensus disorder prediction 103 118 - -
Lja4g3196 182 Pfam Cyclin-dependent kinase inhibitor 134 180 IPR003175 GO:0004861|GO:0005634|GO:0051726
Lja4g3196 182 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 23 181 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3196 Lja-Chr4 60429947 60433060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3196 1 180 Core Cell Cycle Gene Families AT5G48820 37.395 3.37e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3196 - - lja:Lj0g3v0243419.1 360.533