Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3178 ATGGGACAACATTCCATACTCCAAATGAATGGGAACACTCATAGGAAACTCCATGCACTTCTTGGTGGCTTCTTGCGATCCCCACATTTCAAAACTCGAATTACAAGAGATATTGAGCACTCTGTCAAACAATGCTTTGCTACTTGGACTACCCACCAACCAATATACGTTCAAGATCAAGTCAAAAAGATTACATTTACTATTTTGGTAAGAGTTCTGATGAGCATTGGTCCTGGTGAAGACTTAGACTTCTTGAAGAGAGAATTTGAAGAATTTATCAAAGGCTTGATTTGCTTACCAATCAAGTTACCAGGAACAAGACTATATAAATCCTTGAAGGCAAAGATGAGAATGATAAAGATAGTGCAGAGGATAATAGAGGAAAGGAATGATAATAATAAGGGTAGTGGAGTGAATGATGTAGTGGATGTGCTCTTAAGTGATTTGCATAAGGGTGAGTCAAAGTCTTGGTTGAGAATTATGAGCGAGAACATAATTGAGATGATGATTCCTGGAGAAGAGACTCTTCCAACGGCTATGACCATGGCTGTCAAGTTTCTCAGTGACTACCCTCTGGCTCTATCCAAATTACTGGAGGAGAACATGGATTTGAAGAGGCGGAAGAATTGTTCAGATGATTATACATGGACTGACTACTTGTCACTGCAATTTACCCAACATGTTATCAGCGAAACTCTTAGAATGGCAAATATTGTGAACGCCATTTGGAGAAAAGCAATCAAAGACGTAGATATTAAAGGGTACCTAATTCCTAAGGACTGGTGCGTTGTGGCATCTCTAACTTCTGTTCACATGGATGACATGATCTACGAAAACCCTTTTGAATTTGATCCATGGAGATGGGAGAGAATTGGAGCTGGAACTGGGACTAGTAACCATTGTTTCACACCATTTGGTGGTGGACAGAGACTGTGCCCTGGAATAGAACTCTCCAGGCTAGAGCTCTCAATTTTCCTTCACCATCTGGTCACTACTTACGGATGGGTTGCTGAAAAGGATGAAATTATTTACTTTCCAACTGTCAAGATGAAGAGGAAGCTCCCAATCAGCATAACAACCATTGATACCTGA 1092 0.4038 MGQHSILQMNGNTHRKLHALLGGFLRSPHFKTRITRDIEHSVKQCFATWTTHQPIYVQDQVKKITFTILVRVLMSIGPGEDLDFLKREFEEFIKGLICLPIKLPGTRLYKSLKAKMRMIKIVQRIIEERNDNNKGSGVNDVVDVLLSDLHKGESKSWLRIMSENIIEMMIPGEETLPTAMTMAVKFLSDYPLALSKLLEENMDLKRRKNCSDDYTWTDYLSLQFTQHVISETLRMANIVNAIWRKAIKDVDIKGYLIPKDWCVVASLTSVHMDDMIYENPFEFDPWRWERIGAGTGTSNHCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYGWVAEKDEIIYFPTVKMKRKLPISITTIDT* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3178 363 PRINTS E-class P450 group I signature 312 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 PRINTS E-class P450 group I signature 17 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 PRINTS E-class P450 group I signature 226 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 PRINTS E-class P450 group I signature 302 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 PRINTS E-class P450 group I signature 266 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 Pfam Cytochrome P450 5 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 PRINTS P450 superfamily signature 312 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 PRINTS P450 superfamily signature 303 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 PRINTS P450 superfamily signature 227 238 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 PRINTS P450 superfamily signature 171 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 1 358 - -
Lja4g3178 363 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 305 314 IPR017972 GO:0005506|GO:0016705
Lja4g3178 363 SUPERFAMILY Cytochrome P450 3 358 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 Gene3D Cytochrome P450 1 361 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g3178 363 PANTHER CYTOCHROME P450 26 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3178 Lja-Chr4 60069343 60083658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3178 1 333 Cytochrome P450 AT3G13730 50.442 5.40e-118 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3178 K12637 - gmx:100812489 593.193