Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3174 ATGGACACTGGTGGGAAAGCAGAAGAAGAGACTGTTAGAGAGTTGAGGCAGTGCTTCAAAACTGGAAGAACAAGAAGTGTGACATGGAGGAAAAAGCAGCTCAAAGCTCTCCTAGACCTTGTTCATGACAATGAAGATGCCATTTTTGAAGCTCTTTATCAAGATCTTGGAAAGCACCCTGTTGAAGCTTACCGCGACGAGGTTGGAGGGGTAGTAAAATCAGCCACCAACGCTTTGAACAATGTTGACAAATGGATGGCACCTAAGAAGAGTCCTATTCCTTTGCTTTTCTTCCCAGCAAAAGGAGAAGTGTTGCCAGAACCACTTGGAGTGGTTCTCATATTTTCTTCTTGGAACTACCCCATCATATTGGCATTGGATCCATTGATTGGGGCAATATCTGCTGGAAATGTTGTGGTCTTAAAACCATCAGAGCAAGCTCCAGCATGTTCCTCTTTTCTTGCCAAGACCCTTCCTCACTACTTGGACTCTAATGCCATCAAGGTGATTGAGGGTGGAGCAGATGTGTGTGAACAGCTACTGCTGCAGAAATGGGACAAAATATTCTTCACTGGAAGTCCACGTGTGGCTAGCATGGTCATGTCTGCTGCTGCTAAGAATTTAACTCCTGTTACTCTGGAGCTGGGTGGAAAATGCCCTGCCATACTTGATTCCCTTTCCAATCCTTCAGATTTTAAGTTGGCTGTCAAAAGAATCGTAGGAGGGAAGTGGGGAGCGTGTAATGGACAAGCATGTATAGGAATCGACTATGTTCTTGTTGAAGAGAAGTTCTCATCTGATCTGATAGAACTATTGAAGAAGTTCATCAGAAAGTTTTTTGGTGACAACCCATTAGAGTCAAAGTCATTGTCGCGAATAGTGAATAAGCAGCACTTTCAAAGATTAGGCAATCTTCTTAAAGACCCTCTTGTTGCTGCTTCCATCGTTCATGGCGGCTCCGCAAATGAAGAAAACCTGTTCATTGAGCCCACAATCTTGTTAGATCCTCCACTAGACGCGGAGATAATGACAGAAGAAATCTTTGGACCACTGCTTCCAGTGATCACAGTGAAAAATATTCAGGAAACTATTGAATTTGTCAATTCAAGACCAAAACCTCTAACCCTTTATGCCTTCACCAAAAATGAAGCTTTCAAGACACAGATTCTATCAGAAACCTCTTCGGGGAGTGTCGTATTCAATGATTCACTGGTTCAATTTTTATGTGATACACTCCCCTTTGGAGGTGTTGGCCAGAGTGGCATGGGAAGGTACCATGGGAAGTTCTCCTTTGACACTTTCAGCCATGAAAAAGCAGTAATGCATAGAAGGCTGTGCCTTGAAATTGAACCAAGGTACCCTCCTTGGAATAATTTCAAGCTAGAGTTTATCAAATTGGCATATAGATTGAACTACTTTGGACTAGTTCTGCACATGCTGGGCTTGAAAAAACACTAG 1458 0.4294 MDTGGKAEEETVRELRQCFKTGRTRSVTWRKKQLKALLDLVHDNEDAIFEALYQDLGKHPVEAYRDEVGGVVKSATNALNNVDKWMAPKKSPIPLLFFPAKGEVLPEPLGVVLIFSSWNYPIILALDPLIGAISAGNVVVLKPSEQAPACSSFLAKTLPHYLDSNAIKVIEGGADVCEQLLLQKWDKIFFTGSPRVASMVMSAAAKNLTPVTLELGGKCPAILDSLSNPSDFKLAVKRIVGGKWGACNGQACIGIDYVLVEEKFSSDLIELLKKFIRKFFGDNPLESKSLSRIVNKQHFQRLGNLLKDPLVAASIVHGGSANEENLFIEPTILLDPPLDAEIMTEEIFGPLLPVITVKNIQETIEFVNSRPKPLTLYAFTKNEAFKTQILSETSSGSVVFNDSLVQFLCDTLPFGGVGQSGMGRYHGKFSFDTFSHEKAVMHRRLCLEIEPRYPPWNNFKLEFIKLAYRLNYFGLVLHMLGLKKH* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3174 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Lja4g3174 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Lja4g3174 485 Pfam Aldehyde dehydrogenase family 10 440 IPR015590 GO:0016491
Lja4g3174 485 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 9 484 - -
Lja4g3174 485 SUPERFAMILY ALDH-like 10 457 IPR016161 GO:0016491
Lja4g3174 485 PIRSF ALDH 2 481 IPR012394 GO:0006081
Lja4g3174 485 PANTHER ALDEHYDE DEHYDROGENASE 9 484 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3174 Lja-Chr4 59993467 59997450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3174 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 62.810 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3174 K00128 - gmx:100809812 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3174 4 59993467 59997450 Lja4g3174 4 59993467 59997450 ECH